Literature DB >> 17038340

ssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies.

Dale R Nyholt1.   

Abstract

UNLABELLED: ssSNPer is a novel user-friendly web interface that provides easy determination of the number and location of untested HapMap SNPs, in the region surrounding a tested HapMap SNP, which are statistically similar and would thus produce comparable and perhaps more significant association results. Identification of ssSNPs can have crucial implications for the interpretation of the initial association results and the design of follow-up studies. AVAILABILITY: http://fraser.qimr.edu.au/general/daleN/ssSNPer/

Mesh：

Year:  2006        PMID： 17038340     DOI： 10.1093/bioinformatics/btl518

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  10 in total

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Authors:  Nilesh J Samani; Peter S Braund; Jeanette Erdmann; Anika Götz; Maciej Tomaszewski; Patrick Linsel-Nitschke; Cother Hajat; Massimo Mangino; Christian Hengstenberg; Klaus Stark; Andreas Ziegler; Mark Caulfield; Paul R Burton; Heribert Schunkert; Martin D Tobin
Journal:  J Mol Med (Berl)       Date:  2008-07-23       Impact factor: 4.599

2.  Common variation in the fibroblast growth factor receptor 2 gene is not associated with endometriosis risk.

Authors:  Zhen Zhen Zhao; Pamela M Pollock; Shane Thomas; Susan A Treloar; Dale R Nyholt; Grant W Montgomery
Journal:  Hum Reprod       Date:  2008-02-18       Impact factor: 6.918

3.  Polymorphisms in the syntaxin 17 gene are not associated with human cutaneous malignant melanoma.

Authors:  Zhen Zhen Zhao; David L Duffy; Shane A Thomas; Nicholas G Martin; Nicholas K Hayward; Grant W Montgomery
Journal:  Melanoma Res       Date:  2009-04       Impact factor: 3.599

4.  Dyslexia and DCDC2: normal variation in reading and spelling is associated with DCDC2 polymorphisms in an Australian population sample.

Authors:  Penelope A Lind; Michelle Luciano; Margaret J Wright; Grant W Montgomery; Nicholas G Martin; Timothy C Bates
Journal:  Eur J Hum Genet       Date:  2010-01-13       Impact factor: 4.246

5.  The genetic basis of primary biliary cirrhosis: premises, not promises.

Authors:  Pietro Invernizzi; M Eric Gershwin
Journal:  Gastroenterology       Date:  2008-09-04       Impact factor: 22.682

6.  The role of GABRA2 in alcohol dependence, smoking, and illicit drug use in an Australian population sample.

Authors:  Penelope A Lind; Stuart Macgregor; Arpana Agrawal; Grant W Montgomery; Andrew C Heath; Nicholas G Martin; John B Whitfield
Journal:  Alcohol Clin Exp Res       Date:  2008-08-22       Impact factor: 3.455

7.  A common genetic variant (97906C>A) of DAB2IP/AIP1 is associated with an increased risk and early onset of lung cancer in Chinese males.

Authors:  Lei Yang; Yinyan Li; Xiaoxuan Ling; Lin Liu; Bin Liu; Kevin Xu; Xiaonong Bin; Weidong Ji; Jiachun Lu
Journal:  PLoS One       Date:  2011-10-26       Impact factor: 3.240

8.  Interferon regulatory factor 5 (IRF5) gene variants are associated with multiple sclerosis in three distinct populations.

Authors:  G Kristjansdottir; J K Sandling; A Bonetti; I M Roos; L Milani; C Wang; S M Gustafsdottir; S Sigurdsson; A Lundmark; P J Tienari; K Koivisto; I Elovaara; T Pirttilä; M Reunanen; L Peltonen; J Saarela; J Hillert; T Olsson; U Landegren; A Alcina; O Fernández; L Leyva; M Guerrero; M Lucas; G Izquierdo; F Matesanz; A-C Syvänen
Journal:  J Med Genet       Date:  2008-02-19       Impact factor: 6.318

9.  Association between the NBS1 E185Q polymorphism and cancer risk: a meta-analysis.

Authors:  Meixia Lu; Jiachun Lu; Xiaobo Yang; Miao Yang; Hao Tan; Bai Yun; Luyuan Shi
Journal:  BMC Cancer       Date:  2009-04-24       Impact factor: 4.430

10.  Toward targeting B cell cancers with CD4+ CTLs: identification of a CD19-encoded minor histocompatibility antigen using a novel genome-wide analysis.

Authors:  Robbert M Spaapen; Henk M Lokhorst; Kelly van den Oudenalder; Brith E Otterud; Harry Dolstra; Mark F Leppert; Monique C Minnema; Andries C Bloem; Tuna Mutis
Journal:  J Exp Med       Date:  2008-11-10       Impact factor: 14.307
  10 in total

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