Literature DB >> 17037918

Quantification and identification of components in solution mixtures from 1D proton NMR spectra using singular value decomposition.

Qiuwei Xu1, Jeffrey R Sachs, Ting-Chuan Wang, William H Schaefer.   

Abstract

One-dimensional proton NMR spectra of complex solutions provide rich molecular information, but limited chemical shift dispersion creates peak overlap that often leads to difficulty in peak identification and analyte quantification. Modern high-field NMR spectrometers provide high digital resolution with improved peak dispersion. We took advantage of these spectral qualities and developed a quantification method based on linear least-squares fitting using singular value decomposition (SVD). The linear least-squares fitting of a mixture spectrum was performed on the basis of reference spectra from individual small-molecule analytes. Each spectrum contained an internal quantitative reference (e.g., DSS-d6 or other suitable small molecules) by which the intensity of the spectrum was scaled. Normalization of the spectrum facilitated quantification based on peak intensity using linear least-squares fitting analysis. This methodology provided quantification of individual analytes as well as chemical identification. The analysis of small-molecule analytes over a wide concentration range indicated the accuracy and reproducibility of the SVD-based quantification. To account for the contribution from residual protein, lipid or polysaccharide in solution, a reference spectrum showing the macromolecules or aggregates was obtained using a diffusion-edited 1D proton NMR analysis. We demonstrated this approach with a mixture of small-molecule analytes in the presence of macromolecules (e.g., protein). The results suggested that this approach should be applicable to the quantification and identification of small-molecule analytes in complex biological samples.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17037918     DOI: 10.1021/ac0606857

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  4 in total

1.  Metabolic profiles show specific mitochondrial toxicities in vitro in myotube cells.

Authors:  Qiuwei Xu; Heather Vu; Liping Liu; Ting-Chuan Wang; William H Schaefer
Journal:  J Biomol NMR       Date:  2011-02-26       Impact factor: 2.835

Review 2.  Quantitative 1H NMR. Development and potential of an analytical method: an update.

Authors:  Guido F Pauli; Tanja Gödecke; Birgit U Jaki; David C Lankin
Journal:  J Nat Prod       Date:  2012-04-06       Impact factor: 4.050

3.  The structural basis for homotropic and heterotropic cooperativity of midazolam metabolism by human cytochrome P450 3A4.

Authors:  Arthur G Roberts; Jing Yang; James R Halpert; Sidney D Nelson; Kenneth T Thummel; William M Atkins
Journal:  Biochemistry       Date:  2011-11-22       Impact factor: 3.162

4.  Stitching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation.

Authors:  Jun Zhu; Pavel Sova; Qiuwei Xu; Kenneth M Dombek; Ethan Y Xu; Heather Vu; Zhidong Tu; Rachel B Brem; Roger E Bumgarner; Eric E Schadt
Journal:  PLoS Biol       Date:  2012-04-03       Impact factor: 8.029

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.