Literature DB >> 17035359

Statistical genetics concepts and approaches in schizophrenia and related neuropsychiatric research.

Nicholas J Schork1, Tiffany A Greenwood, David L Braff.   

Abstract

Statistical genetics is a research field that focuses on mathematical models and statistical inference methodologies that relate genetic variations (ie, naturally occurring human DNA sequence variations or "polymorphisms") to particular traits or diseases (phenotypes) usually from data collected on large samples of families or individuals. The ultimate goal of such analysis is the identification of genes and genetic variations that influence disease susceptibility. Although of extreme interest and importance, the fact that many genes and environmental factors contribute to neuropsychiatric diseases of public health importance (eg, schizophrenia, bipolar disorder, and depression) complicates relevant studies and suggests that very sophisticated mathematical and statistical modeling may be required. In addition, large-scale contemporary human DNA sequencing and related projects, such as the Human Genome Project and the International HapMap Project, as well as the development of high-throughput DNA sequencing and genotyping technologies have provided statistical geneticists with a great deal of very relevant and appropriate information and resources. Unfortunately, the use of these resources and their interpretation are not straightforward when applied to complex, multifactorial diseases such as schizophrenia. In this brief and largely nonmathematical review of the field of statistical genetics, we describe many of the main concepts, definitions, and issues that motivate contemporary research. We also provide a discussion of the most pressing contemporary problems that demand further research if progress is to be made in the identification of genes and genetic variations that predispose to complex neuropsychiatric diseases.

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Year:  2006        PMID: 17035359      PMCID: PMC2632283          DOI: 10.1093/schbul/sbl045

Source DB:  PubMed          Journal:  Schizophr Bull        ISSN: 0586-7614            Impact factor:   9.306


  66 in total

1.  Haplotypes vs single marker linkage disequilibrium tests: what do we gain?

Authors:  J Akey; L Jin; M Xiong
Journal:  Eur J Hum Genet       Date:  2001-04       Impact factor: 4.246

2.  A multivariate prediction model of schizophrenia.

Authors:  John W Carter; Fini Schulsinger; Josef Parnas; Tyrone Cannon; Sarnoff A Mednick
Journal:  Schizophr Bull       Date:  2002       Impact factor: 9.306

3.  Genome-wide scan for linkage to schizophrenia in a Spanish-origin cohort from Costa Rica.

Authors:  Lynn E DeLisi; Andrea Mesen; Carlos Rodriguez; Arturo Bertheau; Beatrice LaPrade; Michelle Llach; Silvina Riondet; Kamran Razi; Margaret Relja; William Byerley; Robin Sherrington
Journal:  Am J Med Genet       Date:  2002-07-08

4.  Gene-gene interaction between MAOA and COMT in suicidal behavior: analysis in schizophrenia.

Authors:  Vincenzo De Luca; Subi Tharmalingam; Daniel J Müller; Greg Wong; Andrea de Bartolomeis; James L Kennedy
Journal:  Brain Res       Date:  2006-05-24       Impact factor: 3.252

5.  The Odyssean personality. A survival advantage for carriers of genes predisposing to schizophrenia?

Authors:  L F Jarvik; B S Deckard
Journal:  Neuropsychobiology       Date:  1977       Impact factor: 2.328

Review 6.  Subtyping schizophrenia: implications for genetic research.

Authors:  A Jablensky
Journal:  Mol Psychiatry       Date:  2006-06-27       Impact factor: 15.992

7.  The transmission/disequilibrium test detects cosegregation and linkage.

Authors:  R S Spielman; R E McGinnis; W J Ewens
Journal:  Am J Hum Genet       Date:  1994-03       Impact factor: 11.025

8.  The association between the Val158Met polymorphism of the catechol-O-methyl transferase gene and morphological abnormalities of the brain in chronic schizophrenia.

Authors:  Takashi Ohnishi; Ryota Hashimoto; Takeyuki Mori; Kiyotaka Nemoto; Yoshiya Moriguchi; Hidehiro Iida; Hiroko Noguchi; Tetsuo Nakabayashi; Hiroaki Hori; Mayu Ohmori; Ryoutaro Tsukue; Kimitaka Anami; Naotugu Hirabayashi; Seiichi Harada; Kunimasa Arima; Osamu Saitoh; Hiroshi Kunugi
Journal:  Brain       Date:  2005-12-05       Impact factor: 13.501

Review 9.  The molecular genetics of schizophrenia: new findings promise new insights.

Authors:  M J Owen; N M Williams; M C O'Donovan
Journal:  Mol Psychiatry       Date:  2004-01       Impact factor: 15.992

10.  The case for a US prospective cohort study of genes and environment.

Authors:  Francis S Collins
Journal:  Nature       Date:  2004-05-27       Impact factor: 49.962

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  12 in total

1.  The impact of clinical heterogeneity in schizophrenia on genomic analyses.

Authors:  Sherri G Liang; Tiffany A Greenwood
Journal:  Schizophr Res       Date:  2014-12-10       Impact factor: 4.939

2.  The Consortium on the Genetics of Endophenotypes in Schizophrenia: model recruitment, assessment, and endophenotyping methods for a multisite collaboration.

Authors:  Monica E Calkins; Dorcas J Dobie; Kristin S Cadenhead; Ann Olincy; Robert Freedman; Michael F Green; Tiffany A Greenwood; Raquel E Gur; Ruben C Gur; Gregory A Light; Jim Mintz; Keith H Nuechterlein; Allen D Radant; Nicholas J Schork; Larry J Seidman; Larry J Siever; Jeremy M Silverman; William S Stone; Neal R Swerdlow; Debby W Tsuang; Ming T Tsuang; Bruce I Turetsky; David L Braff
Journal:  Schizophr Bull       Date:  2006-10-11       Impact factor: 9.306

3.  Brain electrophysiological endophenotypes for externalizing psychopathology: a multivariate approach.

Authors:  Casey S Gilmore; Stephen M Malone; William G Iacono
Journal:  Behav Genet       Date:  2010-02-13       Impact factor: 2.805

Review 4.  Deconstructing schizophrenia: an overview of the use of endophenotypes in order to understand a complex disorder.

Authors:  David L Braff; Robert Freedman; Nicholas J Schork; Irving I Gottesman
Journal:  Schizophr Bull       Date:  2006-11-06       Impact factor: 9.306

5.  Heritability of neurocognitive traits in familial schizophrenia.

Authors:  Janice A Husted; Sooyeol Lim; Eva W C Chow; Celia Greenwood; Anne S Bassett
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2009-09-05       Impact factor: 3.568

6.  Association between the G1001C polymorphism in the GRIN1 gene promoter and schizophrenia in the Iranian population.

Authors:  Hamid Galehdari; Atefeh Pooryasin; Alimohammad Foroughmand; Setareh Daneshmand; Mostafa Saadat
Journal:  J Mol Neurosci       Date:  2008-09-16       Impact factor: 3.444

7.  Verbal working memory impairments in individuals with schizophrenia and their first-degree relatives: findings from the Consortium on the Genetics of Schizophrenia.

Authors:  William P Horan; David L Braff; Keith H Nuechterlein; Catherine A Sugar; Kristin S Cadenhead; Monica E Calkins; Dorcas J Dobie; Robert Freedman; Tiffany A Greenwood; Raquel E Gur; Ruben C Gur; Gregory A Light; James Mintz; Ann Olincy; Allan D Radant; Nicholas J Schork; Larry J Seidman; Larry J Siever; Jeremy M Silverman; William S Stone; Neal R Swerdlow; Debbie W Tsuang; Ming T Tsuang; Bruce I Turetsky; Michael F Green
Journal:  Schizophr Res       Date:  2008-04-11       Impact factor: 4.939

8.  Genome-wide linkage analyses of 12 endophenotypes for schizophrenia from the Consortium on the Genetics of Schizophrenia.

Authors:  Tiffany A Greenwood; Neal R Swerdlow; Raquel E Gur; Kristin S Cadenhead; Monica E Calkins; Dorcas J Dobie; Robert Freedman; Michael F Green; Ruben C Gur; Laura C Lazzeroni; Keith H Nuechterlein; Ann Olincy; Allen D Radant; Amrita Ray; Nicholas J Schork; Larry J Seidman; Larry J Siever; Jeremy M Silverman; William S Stone; Catherine A Sugar; Debby W Tsuang; Ming T Tsuang; Bruce I Turetsky; Gregory A Light; David L Braff
Journal:  Am J Psychiatry       Date:  2013-05       Impact factor: 18.112

9.  Association analysis of 94 candidate genes and schizophrenia-related endophenotypes.

Authors:  Tiffany A Greenwood; Gregory A Light; Neal R Swerdlow; Allen D Radant; David L Braff
Journal:  PLoS One       Date:  2012-01-13       Impact factor: 3.240

10.  Systems biology, bioinformatics, and biomarkers in neuropsychiatry.

Authors:  Ali Alawieh; Fadi A Zaraket; Jian-Liang Li; Stefania Mondello; Amaly Nokkari; Mahdi Razafsha; Bilal Fadlallah; Rose-Mary Boustany; Firas H Kobeissy
Journal:  Front Neurosci       Date:  2012-12-24       Impact factor: 4.677

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