Literature DB >> 17025959

Time-reversible Born-Oppenheimer molecular dynamics.

Anders M N Niklasson1, C J Tymczak, Matt Challacombe.   

Abstract

We present a time-reversible Born-Oppenheimer molecular dynamics scheme, based on self-consistent Hartree-Fock or density functional theory, where both the nuclear and the electronic degrees of freedom are propagated in time. We show how a time-reversible adiabatic propagation of the electronic degrees of freedom is possible despite the nonlinearity and incompleteness of the self-consistent field procedure. With a time-reversible lossless propagation the simulated dynamics is stabilized with respect to a systematic long-term energy drift and the number of self-consistency cycles can be kept low thanks to a good initial guess given from the electronic propagation. The proposed molecular dynamics scheme therefore combines a low computational cost with a physically correct time-reversible representation, which preserves a detailed balance between propagation forwards and backwards in time.

Entities:  

Year:  2006        PMID: 17025959     DOI: 10.1103/PhysRevLett.97.123001

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  7 in total

1.  Lagrangian formulation with dissipation of Born-Oppenheimer molecular dynamics using the density-functional tight-binding method.

Authors:  Guishan Zheng; Anders M N Niklasson; Martin Karplus
Journal:  J Chem Phys       Date:  2011-07-28       Impact factor: 3.488

2.  Born-Oppenheimer Ab Initio QM/MM Molecular Dynamics Simulations of Enzyme Reactions.

Authors:  Y Zhou; S Wang; Y Li; Y Zhang
Journal:  Methods Enzymol       Date:  2016-06-23       Impact factor: 1.600

3.  Identifying the Molecular Properties that Drive Explosive Sensitivity in a Series of Nitrate Esters.

Authors:  Nicholas Lease; Lisa M Klamborowski; Romain Perriot; Marc J Cawkwell; Virginia W Manner
Journal:  J Phys Chem Lett       Date:  2022-10-03       Impact factor: 6.888

4.  Aromatic borozene.

Authors:  N Gonzalez Szwacki; V Weber; Cj Tymczak
Journal:  Nanoscale Res Lett       Date:  2009-06-11       Impact factor: 4.703

5.  Interfacing ab initio Quantum Mechanical Method with Classical Drude Osillator Polarizable Model for Molecular Dynamics Simulation of Chemical Reactions.

Authors:  Zhenyu Lu; Yingkai Zhang
Journal:  J Chem Theory Comput       Date:  2008       Impact factor: 6.006

Review 6.  Advanced Potential Energy Surfaces for Molecular Simulation.

Authors:  Alex Albaugh; Henry A Boateng; Richard T Bradshaw; Omar N Demerdash; Jacek Dziedzic; Yuezhi Mao; Daniel T Margul; Jason Swails; Qiao Zeng; David A Case; Peter Eastman; Lee-Ping Wang; Jonathan W Essex; Martin Head-Gordon; Vijay S Pande; Jay W Ponder; Yihan Shao; Chris-Kriton Skylaris; Ilian T Todorov; Mark E Tuckerman; Teresa Head-Gordon
Journal:  J Phys Chem B       Date:  2016-09-22       Impact factor: 3.466

7.  Towards large scale hybrid QM/MM dynamics of complex systems with advanced point dipole polarizable embeddings.

Authors:  Daniele Loco; Louis Lagardère; Gérardo A Cisneros; Giovanni Scalmani; Michael Frisch; Filippo Lipparini; Benedetta Mennucci; Jean-Philip Piquemal
Journal:  Chem Sci       Date:  2019-06-11       Impact factor: 9.825

  7 in total

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