Literature DB >> 17020868

On the hydrodynamic analysis of macromolecular conformation.

S E Harding1.   

Abstract

Hydrodynamics provides a powerful complementary role to the traditional "high resolution" techniques for the investigation of macromolecular conformation, especially in dilute solution, conditions which are generally inaccessible to other structural techniques. This paper describes the state of art of hydrodynamic representations for macromolecular conformation, in terms of (1) simple but straightforward ellipsoid of revolution modelling; (2) general triaxial ellipsoid modelling; (3) hydrodynamic bead modelling; (4) the ability, especially for polydisperse macromolecular systems, to distinguish between various conformation types; (5) analysis of macromolecular flexibility.

Year:  1995        PMID: 17020868     DOI: 10.1016/0301-4622(94)00143-8

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  17 in total

1.  The conformation of serum albumin in solution: a combined phosphorescence depolarization-hydrodynamic modeling study.

Authors:  M L Ferrer; R Duchowicz; B Carrasco; J G de la Torre; A U Acuña
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

2.  Calculation of hydrodynamic properties of globular proteins from their atomic-level structure.

Authors:  J García De La Torre; M L Huertas; B Carrasco
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

3.  Modeling the hydration of proteins: prediction of structural and hydrodynamic parameters from X-ray diffraction and scattering data.

Authors:  Helmut Durchschlag; Peter Zipper
Journal:  Eur Biophys J       Date:  2003-04-25       Impact factor: 1.733

4.  Nonnative protein polymers: structure, morphology, and relation to nucleation and growth.

Authors:  William F Weiss; Travis K Hodgdon; Eric W Kaler; Abraham M Lenhoff; Christopher J Roberts
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

5.  Multi-scale calculation and global-fit analysis of hydrodynamic properties of biological macromolecules: determination of the overall conformation of antibody IgG molecules.

Authors:  D Amorós; A Ortega; S E Harding; J García de la Torre
Journal:  Eur Biophys J       Date:  2008-12-18       Impact factor: 1.733

6.  Correlation of SEC/MALLS with ultracentrifuge and viscometric data for chitosans.

Authors:  Monica Fee; Neil Errington; Kornelia Jumel; Lisbeth Illum; Alan Smith; Stephen E Harding
Journal:  Eur Biophys J       Date:  2003-06-14       Impact factor: 1.733

7.  Irreversible adsorption of gold nanospheres on fiber optical tapers and microspheres.

Authors:  Jihaeng Yi; Chih-Yu Jao; Ishac L N Kandas; Bo Liu; Yong Xu; Hans D Robinson
Journal:  Appl Phys Lett       Date:  2012-04-10       Impact factor: 3.791

8.  Insights into the molecular activation mechanism of the RhoA-specific guanine nucleotide exchange factor, PDZRhoGEF.

Authors:  Jakub A Bielnicki; Alexander V Shkumatov; Urszula Derewenda; Avril V Somlyo; Dmitri I Svergun; Zygmunt S Derewenda
Journal:  J Biol Chem       Date:  2011-08-04       Impact factor: 5.157

9.  Outer membrane targeting of secretin PulD protein relies on disordered domain recognition by a dedicated chaperone.

Authors:  Nicholas N Nickerson; Tommaso Tosi; Andréa Dessen; Bruno Baron; Bertrand Raynal; Patrick England; Anthony P Pugsley
Journal:  J Biol Chem       Date:  2011-08-30       Impact factor: 5.157

10.  Hydrodynamic examination of the dimeric cytoplasmic domain of the human erythrocyte anion transporter, band 3.

Authors:  H Cölfen; S E Harding; J M Boulter; A Watts
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

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