Literature DB >> 17020359

Quantitative characterization of changes in dynamical behavior for single-particle tracking studies.

D Montiel1, H Cang, H Yang.   

Abstract

Single-particle tracking experiments have been used widely to study the heterogeneity of a sample. Segments with dissimilar diffusive behaviors are associated with different intermediate states, usually by visual inspection of the tracking trace. A likelihood-based, systematic approach is presented to remove this incertitude. Maximum likelihood estimators are derived for the determination of diffusion coefficients. A likelihood ratio test is applied to the localization of the changes in them. Simulations suggest that the proposed procedure is statistically robust and is able to quantitatively recover time-dependent changes in diffusion coefficients even in the presence of large measurement noise.

Mesh:

Year:  2006        PMID: 17020359     DOI: 10.1021/jp062024j

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  39 in total

1.  Three-dimensional tracking of single mRNA particles in Saccharomyces cerevisiae using a double-helix point spread function.

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2.  Controlling Brownian motion of single protein molecules and single fluorophores in aqueous buffer.

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4.  Analysis of molecular diffusion by first-passage time variance identifies the size of confinement zones.

Authors:  Vishaal Rajani; Gustavo Carrero; David E Golan; Gerda de Vries; Christopher W Cairo
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5.  Quantifying biomolecule diffusivity using an optimal Bayesian method.

Authors:  Guillaume Voisinne; Antigoni Alexandrou; Jean-Baptiste Masson
Journal:  Biophys J       Date:  2010-02-17       Impact factor: 4.033

Review 6.  Single-particle tracking as a quantitative microscopy-based approach to unravel cell entry mechanisms of viruses and pharmaceutical nanoparticles.

Authors:  Nadia Ruthardt; Don C Lamb; Christoph Bräuchle
Journal:  Mol Ther       Date:  2011-06-07       Impact factor: 11.454

7.  An information-based approach to change-point analysis with applications to biophysics and cell biology.

Authors:  Paul A Wiggins
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

8.  Unraveling the Thousand Word Picture: An Introduction to Super-Resolution Data Analysis.

Authors:  Antony Lee; Konstantinos Tsekouras; Christopher Calderon; Carlos Bustamante; Steve Pressé
Journal:  Chem Rev       Date:  2017-04-17       Impact factor: 60.622

9.  Quantitative analysis of DNA-looping kinetics from tethered particle motion experiments.

Authors:  Carlo Manzo; Laura Finzi
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

10.  Confocal, three-dimensional tracking of individual quantum dots in high-background environments.

Authors:  Nathan P Wells; Guillaume A Lessard; James H Werner
Journal:  Anal Chem       Date:  2008-12-15       Impact factor: 6.986

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