Literature DB >> 1701878

Localization and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides.

S C Dryden1, S Kaplan.   

Abstract

We have identified, cloned and sequenced the three ribosomal RNA (rRNA) operons (rrn) present in the facultative photoheterotroph Rhodobacter sphaeroides. DNA sequence analysis has identified the 16S, 23S, and 5S rRNAs, two tRNAs (ile and ala) in the spacer region between the 16S and 23S rRNAs, and an f-met tRNA immediately following the 5S rRNA gene of all three operons. Physical mapping, genetic analysis, and Southern hybridization data indicate that rrnA is contained on a large chromosome and rrnB and rrnC are contained on a second smaller chromosome. These findings are discussed in relation to the origins of diploidy.

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Year:  1990        PMID: 1701878      PMCID: PMC332862          DOI: 10.1093/nar/18.24.7267

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  The kinetics of the synthesis of photopigments in Rhodopseudomonas spheroides.

Authors:  W R SISTROM
Journal:  J Gen Microbiol       Date:  1962-09

2.  Chromosomal organization of rRNA operons in Bacillus subtilis.

Authors:  E D Jarvis; R L Widom; G LaFauci; Y Setoguchi; I R Richter; R Rudner
Journal:  Genetics       Date:  1988-11       Impact factor: 4.562

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Authors:  B Marrs; S Kaplan
Journal:  J Mol Biol       Date:  1970-04-28       Impact factor: 5.469

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Authors:  T G Lessie
Journal:  J Gen Microbiol       Date:  1965-06

Review 5.  Structure and synthesis of the ribosomal ribonucleic acid of prokaryotes.

Authors:  N R Pace
Journal:  Bacteriol Rev       Date:  1973-12

6.  Heterogeneity of 5S RNA in Escherichia coli.

Authors:  B Jarry; R Rosset
Journal:  Mol Gen Genet       Date:  1971

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Authors:  R R Dickson; T Gaal; H A deBoer; P L deHaseth; R L Gourse
Journal:  J Bacteriol       Date:  1989-09       Impact factor: 3.490

8.  Construction of broad-host-range cosmid cloning vectors: identification of genes necessary for growth of Methylobacterium organophilum on methanol.

Authors:  L N Allen; R S Hanson
Journal:  J Bacteriol       Date:  1985-03       Impact factor: 3.490

9.  The 5S ribosomal RNAs of Paracoccus denitrificans and Prochloron.

Authors:  R M MacKay; D Salgado; L Bonen; E Stackebrandt; W F Doolittle
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

10.  Multiple spacer sequences in the nuclear large subunit ribosomal RNA gene of Crithidia fasciculata.

Authors:  D F Spencer; J C Collings; M N Schnare; M W Gray
Journal:  EMBO J       Date:  1987-04       Impact factor: 11.598

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  76 in total

1.  rrndb: the Ribosomal RNA Operon Copy Number Database.

Authors:  J A Klappenbach; P R Saxman; J R Cole; T M Schmidt
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  Divergent mechanisms of 5' 23S rRNA IVS processing in the alpha-proteobacteria.

Authors:  K Zahn; M Inui; H Yukawa
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

Review 3.  Roses by other names: taxonomy of the Rhizobiaceae.

Authors:  William J Broughton
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

4.  Discordant phylogenies within the rrn loci of Rhizobia.

Authors:  Peter van Berkum; Zewdu Terefework; Lars Paulin; Sini Suomalainen; Kristina Lindström; Bertrand D Eardly
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

5.  A compilation of large subunit (23S- and 23S-like) ribosomal RNA structures.

Authors:  R R Gutell; M N Schnare; M W Gray
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

6.  Compilation of small ribosomal subunit RNA sequences.

Authors:  P De Rijk; J M Neefs; Y Van de Peer; R De Wachter
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

7.  Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.

Authors:  Silvia G Acinas; Luisa A Marcelino; Vanja Klepac-Ceraj; Martin F Polz
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

8.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

9.  Roles for the Rhodobacter sphaeroides CcmA and CcmG proteins.

Authors:  R L Cox; C Patterson; T J Donohue
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

10.  Sequencing, chromosomal inactivation, and functional expression in Escherichia coli of ppsR, a gene which represses carotenoid and bacteriochlorophyll synthesis in Rhodobacter sphaeroides.

Authors:  R J Penfold; J M Pemberton
Journal:  J Bacteriol       Date:  1994-05       Impact factor: 3.490

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