Literature DB >> 1701840

Diffusion and kinetic approaches to describe permeation in ionic channels.

J A Dani1, D G Levitt.   

Abstract

Diffusion and reaction rate theories provide convenient approaches for describing permeation in ionic channels. Both approaches have strengths and weaknesses. Diffusion theories realistically approximate the physical process of ion movement within an aqueous pore, but those theories do not handle ionic interactions easily. Reaction rate theories are easy to use, and they provide a mathematical summarization of the data that is valuable for communicating experimental results. During ion permeation, however, the basic assumptions of reaction rate theory are not met. Therefore, rate theories do not provide true physical descriptions of ion permeation.

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Year:  1990        PMID: 1701840     DOI: 10.1016/s0022-5193(05)80740-4

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  18 in total

1.  Framework model for single proton conduction through gramicidin.

Authors:  M F Schumaker; R Pomès; B Roux
Journal:  Biophys J       Date:  2001-01       Impact factor: 4.033

2.  The intrinsic electrostatic potential and the intermediate ring of charge in the acetylcholine receptor channel.

Authors:  G G Wilson; J M Pascual; N Brooijmans; D Murray; A Karlin
Journal:  J Gen Physiol       Date:  2000-02       Impact factor: 4.086

3.  Shaking stack model of ion conduction through the Ca(2+)-activated K+ channel.

Authors:  M F Schumaker
Journal:  Biophys J       Date:  1992-10       Impact factor: 4.033

4.  ThermoKinetic modelling. Membrane potential as a dependent variable in ion transport processes.

Authors:  J M Rohwer; P W Kuchel; A D Maher
Journal:  Mol Biol Rep       Date:  2002       Impact factor: 2.316

5.  Permeation in ionic channels: a statistical rate theory approach.

Authors:  F K Skinner; C A Ward; B L Bardakjian
Journal:  Biophys J       Date:  1993-08       Impact factor: 4.033

6.  Boundary conditions for- single-ion diffusion.

Authors:  P McGill; M F Schumaker
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

7.  Energy barrier presented to ions by the vestibule of the biological membrane channel.

Authors:  M Hoyles; S Kuyucak; S H Chung
Journal:  Biophys J       Date:  1996-04       Impact factor: 4.033

8.  A multi-substrate single-file model for ion-coupled transporters.

Authors:  A Su; S Mager; S L Mayo; H A Lester
Journal:  Biophys J       Date:  1996-02       Impact factor: 4.033

9.  State-dependent accessibility and electrostatic potential in the channel of the acetylcholine receptor. Inferences from rates of reaction of thiosulfonates with substituted cysteines in the M2 segment of the alpha subunit.

Authors:  J M Pascual; A Karlin
Journal:  J Gen Physiol       Date:  1998-06       Impact factor: 4.086

10.  The roles of serine and threonine sidechains in ion channels: a modelling study.

Authors:  M S Sansom
Journal:  Eur Biophys J       Date:  1992       Impact factor: 1.733

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