Literature DB >> 17012799

Crystallization and preliminary X-ray analysis of bacteriophage T4 UvsY recombination mediator protein.

Hang Xu1, Hans T H Beernink, Mark A Rould, Scott W Morrical.   

Abstract

Bacteriophage T4 UvsY protein is considered to be the prototype of recombination mediator proteins, a class of proteins which assist in the loading of recombinases onto DNA. Wild-type and Se-substituted UvsY protein have been expressed and purified and crystallized by hanging-drop vapor diffusion. The crystals diffract to 2.4 A using in-house facilities and to 2.2 A at NSLS, Brookhaven National Laboratory. The crystals belong to space group P422, P4(2)22, P42(1)2 or P4(2)2(1)2, the ambiguity arising from pseudo-centering, with unit-cell parameters a = b = 76.93, c = 269.8 A. Previous biophysical characterization of UvsY indicates that it exists primarily as a hexamer in solution. Along with the absence of a crystallographic threefold, this suggests that the asymmetric unit of these crystals is likely to contain either three monomers, giving a solvent content of 71%, or six monomers, giving a solvent content of 41%.

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Year:  2006        PMID: 17012799      PMCID: PMC2225191          DOI: 10.1107/S1744309106036074

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  18 in total

1.  RMPs: recombination/replication mediator proteins.

Authors:  H T Beernink; S W Morrical
Journal:  Trends Biochem Sci       Date:  1999-10       Impact factor: 13.807

Review 2.  Mediator proteins orchestrate enzyme-ssDNA assembly during T4 recombination-dependent DNA replication and repair.

Authors:  J S Bleuit; H Xu; Y Ma; T Wang; J Liu; S W Morrical
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  Mechanism of presynaptic filament stabilization by the bacteriophage T4 UvsY recombination mediator protein.

Authors:  Jie Liu; Jeffrey P Bond; Scott W Morrical
Journal:  Biochemistry       Date:  2006-05-02       Impact factor: 3.162

4.  Synergistic action of three recombination gene products of bacteriophage T4, uvsX, uvsY, and gene 32 proteins.

Authors:  T Yonesaki; T Minagawa
Journal:  J Biol Chem       Date:  1989-05-15       Impact factor: 5.157

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

Review 6.  Sensing and repairing DNA double-strand breaks.

Authors:  Stephen P Jackson
Journal:  Carcinogenesis       Date:  2002-05       Impact factor: 4.944

7.  The UvsY protein of bacteriophage T4 modulates recombination-dependent DNA synthesis in vitro.

Authors:  S W Morrical; B M Alberts
Journal:  J Biol Chem       Date:  1990-09-05       Impact factor: 5.157

8.  The phage T4 uvs Y recombination protein stabilizes presynaptic filaments.

Authors:  T Kodadek; D C Gan; K Stemke-Hale
Journal:  J Biol Chem       Date:  1989-10-05       Impact factor: 5.157

Review 9.  Regulation and mechanisms of mammalian double-strand break repair.

Authors:  Kristoffer Valerie; Lawrence F Povirk
Journal:  Oncogene       Date:  2003-09-01       Impact factor: 9.867

10.  UvsY protein of bacteriophage T4 is an accessory protein for in vitro catalysis of strand exchange.

Authors:  L D Harris; J D Griffith
Journal:  J Mol Biol       Date:  1989-03-05       Impact factor: 5.469

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  3 in total

1.  Structure and mechanism of the phage T4 recombination mediator protein UvsY.

Authors:  Stefan Gajewski; Michael Brett Waddell; Sivaraja Vaithiyalingam; Amanda Nourse; Zhenmei Li; Nils Woetzel; Nathan Alexander; Jens Meiler; Stephen W White
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

2.  Modified uvsY by N-terminal hexahistidine tag addition enhances efficiency of recombinase polymerase amplification to detect SARS-CoV-2 DNA.

Authors:  Kevin Maafu Juma; Teisuke Takita; Masaya Yamagata; Mika Ishitani; Kaichi Hayashi; Kenji Kojima; Koichiro Suzuki; Yuri Ando; Wakao Fukuda; Shinsuke Fujiwara; Yukiko Nakura; Itaru Yanagihara; Kiyoshi Yasukawa
Journal:  Mol Biol Rep       Date:  2022-01-31       Impact factor: 2.742

3.  Bacteriophage T4 Escapes CRISPR Attack by Minihomology Recombination and Repair.

Authors:  Xiaorong Wu; Jingen Zhu; Pan Tao; Venigalla B Rao
Journal:  mBio       Date:  2021-06-22       Impact factor: 7.867

  3 in total

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