Literature DB >> 17012789

Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of the biosynthetic N-acetylornithine aminotransferases from Salmonella typhimurium and Escherichia coli.

V Rajaram1, K Prasad, P Ratna Prasuna, N Ramachandra, S R Bharath, H S Savithri, M R N Murthy.   

Abstract

Acetylornithine aminotransferase (AcOAT) is a type I pyridoxal 5'-phosphate-dependent enzyme catalyzing the conversion of N-acetylglutamic semialdehyde to N-acetylornithine in the presence of alpha-ketoglutarate, a step involved in arginine metabolism. In Escherichia coli, the biosynthetic AcOAT also catalyzes the conversion of N-succinyl-L-2-amino-6-oxopimelate to N-succinyl-L,L-diaminopimelate, one of the steps in lysine biosynthesis. It is closely related to ornithine aminotransferase. AcOAT was cloned from Salmonella typhimurium and E. coli, overexpressed in E. coli and purified using Ni-NTA affinity column chromatography. The enzymes crystallized in the presence of gabaculine. Crystals of E. coli AcOAT (eAcOAT) only diffracted X-rays to 3.5 A and were twinned. The crystals of S. typhimurium AcOAT (sAcOAT) diffracted to 1.9 A and had a dimer in the asymmetric unit. The structure of sAcOAT was solved by the molecular-replacement method.

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Year:  2006        PMID: 17012789      PMCID: PMC2225180          DOI: 10.1107/S1744309106033884

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  25 in total

1.  SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

2.  Isolation and characterization of acetylornithine delta-transaminase of wild-type Escherichia coli W. Comparison with arginine-inducible acetylornithine delta-transaminase.

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Journal:  Arch Biochem Biophys       Date:  1979-07       Impact factor: 4.013

3.  ACETYLORNITHINE DELTA-TRANSAMINASE. PARTIAL PURIFICATION AND REPRESSION BEHAVIOR.

Authors:  A M ALBRECHT; H J VOGEL
Journal:  J Biol Chem       Date:  1964-06       Impact factor: 5.157

4.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  Escherichia coli and Saccharomyces cerevisiae acetylornithine aminotransferase: evolutionary relationship with ornithine aminotransferase.

Authors:  H Heimberg; A Boyen; M Crabeel; N Glansdorff
Journal:  Gene       Date:  1990-05-31       Impact factor: 3.688

6.  Crystal structure of GABA-aminotransferase, a target for antiepileptic drug therapy.

Authors:  P Storici; G Capitani; D De Biase; M Moser; R A John; J N Jansonius; T Schirmer
Journal:  Biochemistry       Date:  1999-07-06       Impact factor: 3.162

7.  The dual biosynthetic capability of N-acetylornithine aminotransferase in arginine and lysine biosynthesis.

Authors:  R Ledwidge; J S Blanchard
Journal:  Biochemistry       Date:  1999-03-09       Impact factor: 3.162

8.  Proline excretion in Escherichia coli: a comparison of an argD+ strain and a proline-excreting argD- derivative.

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Journal:  Biochem Genet       Date:  1977-04       Impact factor: 1.890

9.  Mechanism of the irreversible inhibition of gamma-aminobutyric acid-alpha-ketoglutaric acid transaminase by the neutrotoxin gabaculine.

Authors:  R R Rando
Journal:  Biochemistry       Date:  1977-10-18       Impact factor: 3.162

10.  Structures of gamma-aminobutyric acid (GABA) aminotransferase, a pyridoxal 5'-phosphate, and [2Fe-2S] cluster-containing enzyme, complexed with gamma-ethynyl-GABA and with the antiepilepsy drug vigabatrin.

Authors:  Paola Storici; Daniela De Biase; Francesco Bossa; Stefano Bruno; Andrea Mozzarelli; Caroline Peneff; Richard B Silverman; Tilman Schirmer
Journal:  J Biol Chem       Date:  2003-10-08       Impact factor: 5.157

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  1 in total

1.  Identification of N(α)-acetyl-α-lysine as a probable thermolyte and its accumulation mechanism in Salinicoccus halodurans H3B36.

Authors:  Kai Jiang; Yanfen Xue; Yanhe Ma
Journal:  Sci Rep       Date:  2015-12-21       Impact factor: 4.379

  1 in total

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