Literature DB >> 1700854

B2 RNA and 7SK RNA, RNA polymerase III transcripts, have a cap-like structure at their 5' end.

G P Shumyatsky1, S V Tillib, D A Kramerov.   

Abstract

We found that hydrolysates of poly(A)+ RNA from Ehrlich ascites carcinoma cells which were transcribed by RNA polymerase III contained an unusual component designated as X. It was part of B2 RNA representing a transcript of B2 retroposon, typical of rodents. The component X possesses a cap-like structure, xppp5'G, where x has a non-nucleotide structure. About half of all B2 RNAs contained this group at the 5' end. Previously, Epstein et al. (1) detected a similar structure at the 5' end of small nuclear U6 RNA. Later, Singh and Reddy (2) showed methyl to be the blocking group in the component x of U6 RNA. Besides B2 RNA, we found 5' ends containing methyl groups in 7SK RNA.

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Year:  1990        PMID: 1700854      PMCID: PMC332502          DOI: 10.1093/nar/18.21.6347

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

1.  Gamma-monomethyl phosphate: a cap structure in spliceosomal U6 small nuclear RNA.

Authors:  R Singh; R Reddy
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

2.  Sedimentation characteristics of rapidly labelled RNA from HeLa cells.

Authors:  K SCHERRER; J E DARNELL
Journal:  Biochem Biophys Res Commun       Date:  1962-06-04       Impact factor: 3.575

3.  Nucleotide sequence of small polyadenylated B2 RNA.

Authors:  D A Kramerov; S V Tillib; A P Ryskov; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1985-09-25       Impact factor: 16.971

4.  Biosynthesis and cytoplasmic distribution of small poly(A)-containing B2 RNA.

Authors:  D A Kramerov; S V Tillib; I V Lekakh; A P Ryskov; G P Georgiev
Journal:  Biochim Biophys Acta       Date:  1985-02-20

5.  Compilation of small RNA sequences.

Authors:  R Reddy
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

6.  The capped U6 small nuclear RNA is transcribed by RNA polymerase III.

Authors:  R Reddy; D Henning; G Das; M Harless; D Wright
Journal:  J Biol Chem       Date:  1987-01-05       Impact factor: 5.157

7.  The in vitro transcription of the 7SK RNA gene by RNA polymerase III is dependent only on the presence of an upstream promoter.

Authors:  S Murphy; C Di Liegro; M Melli
Journal:  Cell       Date:  1987-10-09       Impact factor: 41.582

8.  Denaturation of RNA with dimethyl sulfoxide.

Authors:  J H Strauss; R B Kelly; R L Sinsheimer
Journal:  Biopolymers       Date:  1968-06       Impact factor: 2.505

9.  Splicing a spliceosomal RNA.

Authors:  D A Brow; C Guthrie
Journal:  Nature       Date:  1989-01-05       Impact factor: 49.962

10.  U6 small nuclear RNA is transcribed by RNA polymerase III.

Authors:  G R Kunkel; R L Maser; J P Calvet; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

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  22 in total

Review 1.  The 3' end formation in small RNAs.

Authors:  Karthika Perumal; Ram Reddy
Journal:  Gene Expr       Date:  2002

2.  Evolution of mouse B1 repeats: 7SL RNA folding pattern conserved.

Authors:  D Labuda; D Sinnett; C Richer; J M Deragon; G Striker
Journal:  J Mol Evol       Date:  1991-05       Impact factor: 2.395

3.  Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function.

Authors:  D A Wassarman; J A Steitz
Journal:  Mol Cell Biol       Date:  1991-07       Impact factor: 4.272

4.  Inhibition of translation of mRNAs containing gamma-monomethylphosphate cap structure in frog oocytes and in mammalian cells.

Authors:  Y Chen; K Perumal; R Reddy
Journal:  Gene Expr       Date:  2000

Review 5.  The Bin3 RNA methyltransferase targets 7SK RNA to control transcription and translation.

Authors:  Michael S Cosgrove; Ye Ding; William A Rennie; Michael J Lane; Steven D Hanes
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-06-27       Impact factor: 9.957

6.  A differential sequencing-based analysis of the C. elegans noncoding transcriptome.

Authors:  Tengfei Xiao; Yunfei Wang; Huaxia Luo; Lihui Liu; Guifeng Wei; Xiaowei Chen; Yu Sun; Xiaomin Chen; Geir Skogerbø; Runsheng Chen
Journal:  RNA       Date:  2012-02-16       Impact factor: 4.942

7.  7SK snRNA: a noncoding RNA that plays a major role in regulating eukaryotic transcription.

Authors:  B Matija Peterlin; John E Brogie; David H Price
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-08-18       Impact factor: 9.957

8.  Methylphosphate cap structure increases the stability of 7SK, B2 and U6 small RNAs in Xenopus oocytes.

Authors:  G Shumyatsky; D Wright; R Reddy
Journal:  Nucleic Acids Res       Date:  1993-10-11       Impact factor: 16.971

9.  Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release.

Authors:  Wen Liu; Qi Ma; Kaki Wong; Wenbo Li; Kenny Ohgi; Jie Zhang; Aneel Aggarwal; Michael G Rosenfeld
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  Capping signals correspond to the 5' end in four eukaryotic small RNAs containing gamma-monomethylphosphate cap structure.

Authors:  G Shumyatsky; S Shimba; R Reddy
Journal:  Gene Expr       Date:  1994
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