Literature DB >> 17008099

Microbial rhodopsins: functional versatility and genetic mobility.

Adrian K Sharma1, John L Spudich, W Ford Doolittle.   

Abstract

The type 1 (microbial) rhodopsins are a diverse group of photochemically reactive proteins that span the three domains of life. Their broad phylogenetic distribution has motivated conjecture that rhodopsin-like functionality was present in the last common ancestor of all life. Here, we discuss the evolution of the type 1 microbial rhodopsins and document five cases of lateral gene transfer (LGT) between domains. We suggest that, thanks to the functional versatility of these retinylidene proteins and the relative ease with which they can complement the existing energy-generating or photosensory repertoires of many organisms, LGT is in fact the principal force that determines their broad but patchy distribution.

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Year:  2006        PMID: 17008099     DOI: 10.1016/j.tim.2006.09.006

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  72 in total

Review 1.  A glimpse into the basis of vision in the kingdom Mycota.

Authors:  Alexander Idnurm; Surbhi Verma; Luis M Corrochano
Journal:  Fungal Genet Biol       Date:  2010-05-06       Impact factor: 3.495

2.  Running in reverse: rhodopsins sense voltage.

Authors:  Loren L Looger
Journal:  Nat Methods       Date:  2011-12-28       Impact factor: 28.547

3.  A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin-like properties.

Authors:  Yuki Sudo; Kunio Ihara; Shiori Kobayashi; Daisuke Suzuki; Hiroki Irieda; Takashi Kikukawa; Hideki Kandori; Michio Homma
Journal:  J Biol Chem       Date:  2010-12-06       Impact factor: 5.157

4.  Climate change and physical disturbance manipulations result in distinct biological soil crust communities.

Authors:  Blaire Steven; Cheryl R Kuske; La Verne Gallegos-Graves; Sasha C Reed; Jayne Belnap
Journal:  Appl Environ Microbiol       Date:  2015-08-14       Impact factor: 4.792

5.  Molecular bases for the selection of the chromophore of animal rhodopsins.

Authors:  Hoi Ling Luk; Federico Melaccio; Silvia Rinaldi; Samer Gozem; Massimo Olivucci
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-25       Impact factor: 11.205

6.  The fungal opsin gene nop-1 is negatively-regulated by a component of the blue light sensing pathway and influences conidiation-specific gene expression in Neurospora crassa.

Authors:  Jennifer A Bieszke; Liande Li; Katherine A Borkovich
Journal:  Curr Genet       Date:  2007-08-04       Impact factor: 3.886

7.  Role of the cytoplasmic domain in Anabaena sensory rhodopsin photocycling: vectoriality of Schiff base deprotonation.

Authors:  Oleg A Sineshchekov; Elena N Spudich; Vishwa D Trivedi; John L Spudich
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

8.  Three strategically placed hydrogen-bonding residues convert a proton pump into a sensory receptor.

Authors:  Yuki Sudo; John L Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-18       Impact factor: 11.205

9.  Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host.

Authors:  A Martinez; A S Bradley; J R Waldbauer; R E Summons; E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

10.  Using total internal reflection fluorescence microscopy to visualize rhodopsin-containing cells.

Authors:  J L Keffer; C R Sabanayagam; M E Lee; E F DeLong; M W Hahn; J A Maresca
Journal:  Appl Environ Microbiol       Date:  2015-03-13       Impact factor: 4.792

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