Literature DB >> 1700783

Channel formation properties of synthetic pardaxin and analogues.

Y Shai1, D Bach, A Yanovsky.   

Abstract

Six analogues of teh 33-residue shark repellent neurotoxin pardaxin were synthesized by the solid phase method: [Ala13]pardaxin, [Gly14,Gly15]pardaxin, des[1----9]pardaxin, [N1-succinamido]pardaxin, C33-dihydroxyethylamido]pardaxin, and C33-[diaminoethylamido]pardaxin. The spectroscopic and functional characterizations of the analogues are described. The peptides were characterized spectroscopically by circular dichroism (CD) before and after binding to soybean vesicles. They were characterized functionally by measuring their potential to evoke the dissipation of diffusion potential and calcein release from sonicated unilamellar soybean liposomes, by determining their ability to create single channels in planar bilayers, and by measuring their cytolytic activity on human erythrocytes. The behavior of the analogues modified at the C terminus is similar to that of pardaxin. [N'-succinamido]Pardaxin, however, reveals an increase in alpha-helicity both alone and in the presence of liposomes. It has the same potency as pardaxin to dissipate diffusion potential, to evoke calcein release and to produce single channels in lipid bilayers, but at a slower rate than that of pardaxin. It has more than 70-fold less cytolytic activity than pardaxin. [Ala13] Pardaxin has twice the alpha-helical content than pardaxin, both alone and in the presence of vesicles, yet it has less effect on the diffusion potential and calcein release, and it does not have cytolytic activity on human erythrocytes. Both [Gly14,Gly15]pardaxin and des[1----9]pardaxin are much less potent than pardaxin in all effects. However des[1----9]pardaxin exhibits a slight change in alpha-helicity upon binding to vesicles, whereas [Gly14,Gly15]pardaxin does not. The results support a model in which pardaxin is composed of two putative alpha-helices separated by proline. The N-terminal alpha-helix is important for the insertion of the peptide to the lipid bilayer, and the C-terminal amphiphilic alpha-helix is the ion channel lining segment of pardaxin.

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Year:  1990        PMID: 1700783

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  23 in total

1.  Secondary structure, membrane localization, and coassembly within phospholipid membranes of synthetic segments derived from the N- and C-termini regions of the ROMK1 K+ channel.

Authors:  I Ben-Efraim; Y Shai
Journal:  Protein Sci       Date:  1996-11       Impact factor: 6.725

2.  Reversible surface aggregation in pore formation by pardaxin.

Authors:  D Rapaport; R Peled; S Nir; Y Shai
Journal:  Biophys J       Date:  1996-06       Impact factor: 4.033

3.  Androctonin, a hydrophilic disulphide-bridged non-haemolytic anti-microbial peptide: a plausible mode of action.

Authors:  C Hetru; L Letellier; Z Oren; J A Hoffmann; Y Shai
Journal:  Biochem J       Date:  2000-02-01       Impact factor: 3.857

Review 4.  Computer-aided analyses of transport protein sequences: gleaning evidence concerning function, structure, biogenesis, and evolution.

Authors:  M H Saier
Journal:  Microbiol Rev       Date:  1994-03

5.  Conjugation of fatty acids with different lengths modulates the antibacterial and antifungal activity of a cationic biologically inactive peptide.

Authors:  Amir Malina; Yechiel Shai
Journal:  Biochem J       Date:  2005-09-15       Impact factor: 3.857

Review 6.  Membrane-active peptides from marine organisms--antimicrobials, cell-penetrating peptides and peptide toxins: applications and prospects.

Authors:  Nisha Ponnappan; Deepthi Poornima Budagavi; Bhoopesh Kumar Yadav; Archana Chugh
Journal:  Probiotics Antimicrob Proteins       Date:  2015-03       Impact factor: 4.609

7.  Two-dimensional 1H NMR experiments show that the 23-residue magainin antibiotic peptide is an alpha-helix in dodecylphosphocholine micelles, sodium dodecylsulfate micelles, and trifluoroethanol/water solution.

Authors:  J Gesell; M Zasloff; S J Opella
Journal:  J Biomol NMR       Date:  1997-02       Impact factor: 2.835

8.  Membrane composition determines pardaxin's mechanism of lipid bilayer disruption.

Authors:  Kevin J Hallock; Dong-Kuk Lee; John Omnaas; Henry I Mosberg; A Ramamoorthy
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

9.  NMR structure of pardaxin, a pore-forming antimicrobial peptide, in lipopolysaccharide micelles: mechanism of outer membrane permeabilization.

Authors:  Anirban Bhunia; Prerna N Domadia; Jaume Torres; Kevin J Hallock; Ayyalusamy Ramamoorthy; Surajit Bhattacharjya
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

10.  Cholesterol reduces pardaxin's dynamics-a barrel-stave mechanism of membrane disruption investigated by solid-state NMR.

Authors:  Ayyalusamy Ramamoorthy; Dong-Kuk Lee; Tennaru Narasimhaswamy; Ravi P R Nanga
Journal:  Biochim Biophys Acta       Date:  2009-08-28
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