Literature DB >> 17001100

Co-expression of protein complexes in prokaryotic and eukaryotic hosts: experimental procedures, database tracking and case studies.

Christophe Romier1, Marouane Ben Jelloul, Shira Albeck, Gretel Buchwald, Didier Busso, Patrick H N Celie, Evangelos Christodoulou, Valeria De Marco, Suzan van Gerwen, Puck Knipscheer, Joyce H Lebbink, Valerie Notenboom, Arnaud Poterszman, Natacha Rochel, Serge X Cohen, Tamar Unger, Joel L Sussman, Dino Moras, Titia K Sixma, Anastassis Perrakis.   

Abstract

Structure determination and functional characterization of macromolecular complexes requires the purification of the different subunits in large quantities and their assembly into a functional entity. Although isolation and structure determination of endogenous complexes has been reported, much progress has to be made to make this technology easily accessible. Co-expression of subunits within hosts such as Escherichia coli and insect cells has become more and more amenable, even at the level of high-throughput projects. As part of SPINE (Structural Proteomics In Europe), several laboratories have investigated the use co-expression techniques for their projects, trying to extend from the common binary expression to the more complicated multi-expression systems. A new system for multi-expression in E. coli and a database system dedicated to handle co-expression data are described. Results are also reported from various case studies investigating different methods for performing co-expression in E. coli and insect cells.

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Year:  2006        PMID: 17001100     DOI: 10.1107/S0907444906031003

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  47 in total

1.  Noncanonical tandem SH2 enables interaction of elongation factor Spt6 with RNA polymerase II.

Authors:  Marie-Laure Diebold; Erin Loeliger; Michael Koch; Fred Winston; Jean Cavarelli; Christophe Romier
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

2.  Conformational flexibility of RNA polymerase III during transcriptional elongation.

Authors:  Carlos Fernández-Tornero; Bettina Böttcher; Umar Jan Rashid; Ulrich Steuerwald; Beate Flörchinger; Damien P Devos; Doris Lindner; Christoph W Müller
Journal:  EMBO J       Date:  2010-10-22       Impact factor: 11.598

3.  Inducible T7 RNA Polymerase-mediated Multigene Expression System, pMGX.

Authors:  Mohamed I Hassan; Fern R McSorley; Kinya Hotta; Christopher N Boddy
Journal:  J Vis Exp       Date:  2017-06-27       Impact factor: 1.355

4.  Two-color selection for amplified co-production of proteins in mammalian cells.

Authors:  Zahra Assur; Ira Schieren; Wayne A Hendrickson; Filippo Mancia
Journal:  Protein Expr Purif       Date:  2007-05-16       Impact factor: 1.650

Review 5.  The neurobiologist's guide to structural biology: a primer on why macromolecular structure matters and how to evaluate structural data.

Authors:  Daniel L Minor
Journal:  Neuron       Date:  2007-05-24       Impact factor: 17.173

Review 6.  Protein production and purification.

Authors:  Susanne Gräslund; Pär Nordlund; Johan Weigelt; B Martin Hallberg; James Bray; Opher Gileadi; Stefan Knapp; Udo Oppermann; Cheryl Arrowsmith; Raymond Hui; Jinrong Ming; Sirano dhe-Paganon; Hee-won Park; Alexei Savchenko; Adelinda Yee; Aled Edwards; Renaud Vincentelli; Christian Cambillau; Rosalind Kim; Sung-Hou Kim; Zihe Rao; Yunyu Shi; Thomas C Terwilliger; Chang-Yub Kim; Li-Wei Hung; Geoffrey S Waldo; Yoav Peleg; Shira Albeck; Tamar Unger; Orly Dym; Jaime Prilusky; Joel L Sussman; Ray C Stevens; Scott A Lesley; Ian A Wilson; Andrzej Joachimiak; Frank Collart; Irina Dementieva; Mark I Donnelly; William H Eschenfeldt; Youngchang Kim; Lucy Stols; Ruying Wu; Min Zhou; Stephen K Burley; J Spencer Emtage; J Michael Sauder; Devon Thompson; Kevin Bain; John Luz; Tarun Gheyi; Fred Zhang; Shane Atwell; Steven C Almo; Jeffrey B Bonanno; Andras Fiser; Sivasubramanian Swaminathan; F William Studier; Mark R Chance; Andrej Sali; Thomas B Acton; Rong Xiao; Li Zhao; Li Chung Ma; John F Hunt; Liang Tong; Kellie Cunningham; Masayori Inouye; Stephen Anderson; Heleema Janjua; Ritu Shastry; Chi Kent Ho; Dongyan Wang; Huang Wang; Mei Jiang; Gaetano T Montelione; David I Stuart; Raymond J Owens; Susan Daenke; Anja Schütz; Udo Heinemann; Shigeyuki Yokoyama; Konrad Büssow; Kristin C Gunsalus
Journal:  Nat Methods       Date:  2008-02       Impact factor: 28.547

7.  Crystallization and preliminary crystallographic analysis of eukaryotic transcription and mRNA export factor Iws1 from Encephalitozoon cuniculi.

Authors:  Michael Koch; Marie Laure Diebold; Jean Cavarelli; Christophe Romier
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-01-28

8.  Solution structure and flexibility of the condensin HEAT-repeat subunit Ycg1.

Authors:  Karen Manalastas-Cantos; Marc Kschonsak; Christian H Haering; Dmitri I Svergun
Journal:  J Biol Chem       Date:  2019-07-26       Impact factor: 5.157

9.  Getting a grip on complexes.

Authors:  Yan Nie; Cristina Viola; Christoph Bieniossek; Simon Trowitzsch; Lakshmi Sumitra Vijay-Achandran; Maxime Chaillet; Frederic Garzoni; Imre Berger
Journal:  Curr Genomics       Date:  2009-12       Impact factor: 2.236

10.  Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be.

Authors:  Christian Schaefer; Avner Schlessinger; Burkhard Rost
Journal:  Bioinformatics       Date:  2010-01-16       Impact factor: 6.937

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