Literature DB >> 16997968

Multiple GTPases participate in the assembly of the large ribosomal subunit in Bacillus subtilis.

Laura Schaefer1, William C Uicker, Catherine Wicker-Planquart, Anne-Emmanuelle Foucher, Jean-Michel Jault, Robert A Britton.   

Abstract

GTPases have been demonstrated to be necessary for the proper assembly of the ribosome in bacteria and eukaryotes. Here, we show that the essential GTPases YphC and YsxC are required for large ribosomal subunit biogenesis in Bacillus subtilis. Sucrose density gradient centrifugation of large ribosomal subunits isolated from YphC-depleted cells and YsxC-depleted cells indicates that they are similar to the 45S intermediate previously identified in RbgA-depleted cells. The sedimentation of the large-subunit intermediate isolated from YphC-depleted cells was identical to the intermediate found in RbgA-depleted cells, while the intermediate isolated from YsxC-depleted cells sedimented slightly slower than 45S, suggesting that it is a novel intermediate. Analysis of the protein composition of the large-subunit intermediates isolated from either YphC-depleted cells or YsxC-depleted cells indicated that L16 and L36 are missing. Purified YphC and YsxC are able to interact with the ribosome in vitro, supporting a direct role for these two proteins in the assembly of the 50S subunit. Our results indicate that, as has been demonstrated for Saccharomyces cerevisiae ribosome biogenesis, bacterial 50S ribosome assembly requires the function of multiple essential GTPases.

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Year:  2006        PMID: 16997968      PMCID: PMC1698177          DOI: 10.1128/JB.01213-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  High resolution structure of the large ribosomal subunit from a mesophilic eubacterium.

Authors:  J Harms; F Schluenzen; R Zarivach; A Bashan; S Gat; I Agmon; H Bartels; F Franceschi; A Yonath
Journal:  Cell       Date:  2001-11-30       Impact factor: 41.582

2.  Initiation factor IF 2 binds to the alpha-sarcin loop and helix 89 of Escherichia coli 23S ribosomal RNA.

Authors:  A La Teana; C O Gualerzi; A E Dahlberg
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

Review 3.  Nuclear export of ribosomal subunits.

Authors:  Arlen W Johnson; Elsebet Lund; James Dahlberg
Journal:  Trends Biochem Sci       Date:  2002-11       Impact factor: 13.807

4.  Studies of the interaction of Escherichia coli YjeQ with the ribosome in vitro.

Authors:  Denis M Daigle; Eric D Brown
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

5.  A new essential gene of the 'minimal genome' affecting cell division.

Authors:  M Dassain; A Leroy; L Colosetti; S Carolé; J P Bouché
Journal:  Biochimie       Date:  1999 Aug-Sep       Impact factor: 4.079

6.  Six GTP-binding proteins of the Era/Obg family are essential for cell growth in Bacillus subtilis.

Authors:  Takuya Morimoto; Pek Chin Loh; Tomohiro Hirai; Kei Asai; Kazuo Kobayashi; Shigeki Moriya; Naotake Ogasawara
Journal:  Microbiology       Date:  2002-11       Impact factor: 2.777

7.  Overexpression of two different GTPases rescues a null mutation in a heat-induced rRNA methyltransferase.

Authors:  Jacqueline Tan; Ursula Jakob; James C A Bardwell
Journal:  J Bacteriol       Date:  2002-05       Impact factor: 3.490

8.  Analysis of the open and closed conformations of the GTP-binding protein YsxC from Bacillus subtilis.

Authors:  Sergey N Ruzheinikov; Sanjan K Das; Svetlana E Sedelnikova; Patrick J Baker; Peter J Artymiuk; Jorge García-Lara; Simon J Foster; David W Rice
Journal:  J Mol Biol       Date:  2004-05-28       Impact factor: 5.469

9.  A global approach to identify novel broad-spectrum antibacterial targets among proteins of unknown function.

Authors:  Magdalena Zalacain; Sanjoy Biswas; Karen A Ingraham; Jennifer Ambrad; Alexander Bryant; Alison F Chalker; Serban Iordanescu; Jing Fan; Frank Fan; R Dwayne Lunsford; Karen O'Dwyer; Leslie M Palmer; Chi So; Daniel Sylvester; Craig Volker; Patrick Warren; Damien McDevitt; James R Brown; David J Holmes; Martin K R Burnham
Journal:  J Mol Microbiol Biotechnol       Date:  2003

10.  Structural stabilization of GTP-binding domains in circularly permuted GTPases: implications for RNA binding.

Authors:  Baskaran Anand; Sunil Kumar Verma; Balaji Prakash
Journal:  Nucleic Acids Res       Date:  2006-04-28       Impact factor: 16.971

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  37 in total

1.  Biochemical characterization of ribosome assembly GTPase RbgA in Bacillus subtilis.

Authors:  David Achila; Megha Gulati; Nikhil Jain; Robert A Britton
Journal:  J Biol Chem       Date:  2012-01-20       Impact factor: 5.157

2.  Single methylation of 23S rRNA triggers late steps of 50S ribosomal subunit assembly.

Authors:  Taiga Arai; Kensuke Ishiguro; Satoshi Kimura; Yuriko Sakaguchi; Takeo Suzuki; Tsutomu Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-10       Impact factor: 11.205

3.  The essential GTPase YqeH is required for proper ribosome assembly in Bacillus subtilis.

Authors:  William C Uicker; Laura Schaefer; Mark Koenigsknecht; Robert A Britton
Journal:  J Bacteriol       Date:  2007-01-19       Impact factor: 3.490

4.  Crippling the essential GTPase Der causes dependence on ribosomal protein L9.

Authors:  Anusha Naganathan; Sean D Moore
Journal:  J Bacteriol       Date:  2013-06-14       Impact factor: 3.490

5.  The structure of YqeH. An AtNOS1/AtNOA1 ortholog that couples GTP hydrolysis to molecular recognition.

Authors:  Jawahar Sudhamsu; Gyu In Lee; Daniel F Klessig; Brian R Crane
Journal:  J Biol Chem       Date:  2008-09-18       Impact factor: 5.157

6.  Structure of an essential GTPase, YsxC, from Thermotoga maritima.

Authors:  Kwok-Ho Chan; Kam-Bo Wong
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-05-24

Review 7.  The universally conserved prokaryotic GTPases.

Authors:  Natalie Verstraeten; Maarten Fauvart; Wim Versées; Jan Michiels
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

8.  A high-throughput screen of the GTPase activity of Escherichia coli EngA to find an inhibitor of bacterial ribosome biogenesis.

Authors:  Amrita Bharat; Jan E Blanchard; Eric D Brown
Journal:  J Biomol Screen       Date:  2013-04-19

9.  Interactions of an essential Bacillus subtilis GTPase, YsxC, with ribosomes.

Authors:  Catherine Wicker-Planquart; Anne-Emmanuelle Foucher; Mathilde Louwagie; Robert A Britton; Jean-Michel Jault
Journal:  J Bacteriol       Date:  2007-11-02       Impact factor: 3.490

10.  YsxC, an essential protein in Staphylococcus aureus crucial for ribosome assembly/stability.

Authors:  Elizabeth L Cooper; Jorge García-Lara; Simon J Foster
Journal:  BMC Microbiol       Date:  2009-12-18       Impact factor: 3.605

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