Literature DB >> 16997250

Simultaneous rapid estimation of sedimentation coefficient and molecular weight.

L A Holladay1.   

Abstract

Data obtained from the early portion of sedimentation velocity experiments may be analyzed to simultaneously estimate both s and s/D. The C versus r data obtained are analyzed using a nonlinear least squares algorithm and an approximate solution to the Lamm equation. This procedure was tested both with simulated noisy data and with experimental data obtained using ribonuclease, ovalbumin, and somatostatin.dodecylsulfate. The procedure assumes that both s and D are independent of concentration. The results suggest that optimal estimation of both s and s/D is obtained at values of (= 2D/(s.omega(2).r(a)(2))) in the range of 0.002 to 0.01 and values of tau(= 2 somega(2)t) less than 0.04. Appropriate selection of rotor speed allows the estimation of both s and s/D for nearly globular macromolecules in the range of 10(4) to 10(6) daltons with data obtained during the first 3000-5000 seconds of a sedimentation velocity experiment.

Entities:  

Year:  1980        PMID: 16997250     DOI: 10.1016/0301-4622(80)80033-0

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  6 in total

1.  Analytical ultracentrifugation as a contemporary biomolecular research tool.

Authors:  J L Cole; J C Hansen
Journal:  J Biomol Tech       Date:  1999-12

2.  Sedimentation analysis of noninteracting and self-associating solutes using numerical solutions to the Lamm equation.

Authors:  P Schuck
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

3.  Determination of molecular parameters by fitting sedimentation data to finite-element solutions of the Lamm equation.

Authors:  B Demeler; H Saber
Journal:  Biophys J       Date:  1998-01       Impact factor: 4.033

4.  An improved function for fitting sedimentation velocity data for low-molecular-weight solutes.

Authors:  J S Philo
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

5.  Advances in sedimentation velocity analysis.

Authors:  T M Laue
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

6.  Molecular mass determination by sedimentation velocity experiments and direct fitting of the concentration profiles.

Authors:  J Behlke; O Ristau
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

  6 in total

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