Literature DB >> 16989654

Translation initiation and the fate of bacterial mRNAs.

Vladimir R Kaberdin1, Udo Bläsi.   

Abstract

Studies in pro- and eukaryotes have revealed that translation can determine the stability of a given messenger RNA. In bacteria, intrinsic mRNA signals can confer efficient ribosome binding, whereas translational feedback inhibition or environmental cues can interfere with this process. Such regulatory mechanisms are often controlled by RNA-binding proteins, small noncoding RNAs and structural rearrangements within the 5' untranslated region. Here, we review molecular events occurring in the 5' untranslated region of primarily Escherichia coli mRNAs with regard to their effects on mRNA stability.

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Year:  2006        PMID: 16989654     DOI: 10.1111/j.1574-6976.2006.00043.x

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  61 in total

1.  High growth rate downregulates fumA mRNA transcription but is dramatically compensated by its mRNA stability in Escherichia coli.

Authors:  Hsiao-Hsien Lin; Ching-Hsueh Lin; Shiaw-Min Hwang; Ching-Ping Tseng
Journal:  Curr Microbiol       Date:  2012-05       Impact factor: 2.188

2.  Temperature-sensitive mutants of RNase E in Salmonella enterica.

Authors:  Disa L Hammarlöf; Lars Liljas; Diarmaid Hughes
Journal:  J Bacteriol       Date:  2011-09-23       Impact factor: 3.490

Review 3.  Translation initiation: variations in the mechanism can be anticipated.

Authors:  Naglis Malys; John E G McCarthy
Journal:  Cell Mol Life Sci       Date:  2010-11-13       Impact factor: 9.261

Review 4.  RNA polyadenylation and its consequences in prokaryotes.

Authors:  Eliane Hajnsdorf; Vladimir R Kaberdin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

5.  Autogenous regulation of Escherichia coli polynucleotide phosphorylase expression revisited.

Authors:  Thomas Carzaniga; Federica Briani; Sandro Zangrossi; Giuseppe Merlino; Paolo Marchi; Gianni Dehò
Journal:  J Bacteriol       Date:  2009-01-09       Impact factor: 3.490

6.  The Vibrio parahaemolyticus small RNA RyhB promotes production of the siderophore vibrioferrin by stabilizing the polycistronic mRNA.

Authors:  Tomotaka Tanabe; Tatsuya Funahashi; Hiroshi Nakao; Jun Maki; Shigeo Yamamoto
Journal:  J Bacteriol       Date:  2013-06-14       Impact factor: 3.490

7.  Design and optimization of short DNA sequences that can be used as 5' fusion partners for high-level expression of heterologous genes in Escherichia coli.

Authors:  Veronika Kucharova; Jørgen Skancke; Trygve Brautaset; Svein Valla
Journal:  Appl Environ Microbiol       Date:  2013-08-23       Impact factor: 4.792

8.  Unveiling the Metabolic Pathways Associated with the Adaptive Reduction of Cell Size During Vibrio harveyi Persistence in Seawater Microcosms.

Authors:  Vladimir R Kaberdin; Itxaso Montánchez; Claudia Parada; Maite Orruño; Inés Arana; Isabel Barcina
Journal:  Microb Ecol       Date:  2015-04-24       Impact factor: 4.552

9.  Reprogramming of gene expression in Escherichia coli cultured on pyruvate versus glucose.

Authors:  Anna Chao Kaberdina; Olatz Ruiz-Larrabeiti; Sue Lin-Chao; Vladimir R Kaberdin
Journal:  Mol Genet Genomics       Date:  2019-07-30       Impact factor: 3.291

10.  Proteomic alterations explain phenotypic changes in Sinorhizobium meliloti lacking the RNA chaperone Hfq.

Authors:  Lise Barra-Bily; Catherine Fontenelle; Gwenael Jan; Maud Flechard; Annie Trautwetter; Shree P Pandey; Graham C Walker; Carlos Blanco
Journal:  J Bacteriol       Date:  2010-01-15       Impact factor: 3.490

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