Literature DB >> 16988415

Systems biology in cancer research: genomics to cellomics.

Jackie L Stilwell1, Yinghui Guan, Richard M Neve, Joe W Gray.   

Abstract

Cancers result from large-scale deregulation of genes that lead to cancer pathophysiologies such as increase proliferation, decreased apoptosis, increased motility, increased angiogenesis, and others. Genes that influence proliferation and apoptosis are particularly attractive as therapeutic targets. To identify genes that influence these phenotypes, we have developed simple and rapid methods to measure apoptosis and cell proliferation using high content screening with YO-PRO-1 and anti-BrdU staining of BrdU pulsed cells, respectively.

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Year:  2007        PMID: 16988415      PMCID: PMC2733877          DOI: 10.1385/1-59745-217-3:353

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

Review 1.  The hallmarks of cancer.

Authors:  D Hanahan; R A Weinberg
Journal:  Cell       Date:  2000-01-07       Impact factor: 41.582

2.  Two-color, fluorescence-based microplate assay for apoptosis detection.

Authors:  Robert Wronski; Nicole Golob; Elisabeth Grygar; Manfred Windisch
Journal:  Biotechniques       Date:  2002-03       Impact factor: 1.993

Review 3.  Silence of the genes.

Authors:  Oded Singer; Amiel Yanai; Inder M Verma
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-05       Impact factor: 11.205

4.  Computational BAC clone contig assembly for comprehensive genome analysis.

Authors:  Anna Lapuk; Stanislav Volik; Robert Vincent; Koei Chin; Wen-Lin Kuo; Pieter de Jong; Colin Collins; Joe W Gray
Journal:  Genes Chromosomes Cancer       Date:  2004-05       Impact factor: 5.006

5.  Comparative genomic hybridization detects genetic imbalances in primary ovarian carcinomas as correlated with grade of differentiation.

Authors:  M Kiechle; A Jacobsen; U Schwarz-Boeger; J Hedderich; J Pfisterer; N Arnold
Journal:  Cancer       Date:  2001-02-01       Impact factor: 6.860

6.  Comparative genomic hybridization in inherited and sporadic ovarian tumors in Israel.

Authors:  Y Patael-Karasik; M Daniely; W H Gotlieb; G Ben-Baruch; J Schiby; G Barakai; B Goldman; A Aviram; E Friedman
Journal:  Cancer Genet Cytogenet       Date:  2000-08

7.  Comprehensive genome sequence analysis of a breast cancer amplicon.

Authors:  C Collins; S Volik; D Kowbel; D Ginzinger; B Ylstra; T Cloutier; T Hawkins; P Predki; C Martin; M Wernick; W L Kuo; A Alberts; J W Gray
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

8.  An approach to analysis of large-scale correlations between genome changes and clinical endpoints in ovarian cancer.

Authors:  S Suzuki; D H Moore; D G Ginzinger; T E Godfrey; J Barclay; B Powell; D Pinkel; C Zaloudek; K Lu; G Mills; A Berchuck; J W Gray
Journal:  Cancer Res       Date:  2000-10-01       Impact factor: 12.701

9.  Flow cytometric measurement of total DNA content and incorporated bromodeoxyuridine.

Authors:  F Dolbeare; H Gratzner; M G Pallavicini; J W Gray
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

Review 10.  Chromosome aberrations in solid tumors.

Authors:  Donna G Albertson; Colin Collins; Frank McCormick; Joe W Gray
Journal:  Nat Genet       Date:  2003-08       Impact factor: 38.330

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  4 in total

1.  Challenges in small screening laboratories: implementing an on-demand laboratory information management system.

Authors:  Vance P Lemmon; Yuanyuan Jia; Yan Shi; S Douglas Holbrook; John L Bixby; William Buchser
Journal:  Comb Chem High Throughput Screen       Date:  2011-11       Impact factor: 1.339

2.  Microfluidic tissue model for live cell screening.

Authors:  Philip J Lee; Terry A Gaige; Navid Ghorashian; Paul J Hung
Journal:  Biotechnol Prog       Date:  2007-06-22

Review 3.  Biologically Relevant Heterogeneity: Metrics and Practical Insights.

Authors:  Albert Gough; Andrew M Stern; John Maier; Timothy Lezon; Tong-Ying Shun; Chakra Chennubhotla; Mark E Schurdak; Steven A Haney; D Lansing Taylor
Journal:  SLAS Discov       Date:  2017-01-06       Impact factor: 3.341

Review 4.  Systems biology and cancer stem cells.

Authors:  Nathan D Price; Greg Foltz; Anup Madan; Leroy Hood; Qiang Tian
Journal:  J Cell Mol Med       Date:  2007-11-20       Impact factor: 5.310

  4 in total

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