Literature DB >> 16983069

Electrostatic interactions in the channel cavity as an important determinant of potassium channel selectivity.

Delphine Bichet1, Michael Grabe, Yuh Nung Jan, Lily Yeh Jan.   

Abstract

Potassium channels are membrane proteins that allow the passage of potassium ions at near diffusion rates while severely limiting the flux of the slightly smaller sodium ions. Although studies thus far have focused on the narrowest part of the channel, known as the selectivity filter, channels are long pores with multiple ions that traverse the selectivity filter, the water-filled central cavity, and the rest of the pore formed by cytoplasmic domains. Here, we present experimental analyses on Kir3.2 (GIRK2), a G protein-activated inwardly rectifying potassium (Kir) channel, showing that a negative charge introduced at a pore-facing position in the cavity (N184) below the selectivity filter restores both K(+) selectivity and inward rectification properties to the nonselective S177W mutant channel. Molecular modeling demonstrates that the negative residue has no effect on the geometry of the selectivity filter, suggesting that it has a local effect on the cavity ion. Moreover, restoration of selectivity does not depend on the exact location of the charge in the central cavity as long as this residue faces the pore, where it is in close contact with permeant ions. Our results indicate that interactions between permeant ions and the channel cavity can influence ion selectivity and channel block by means of an electrostatic effect.

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Year:  2006        PMID: 16983069      PMCID: PMC1570129          DOI: 10.1073/pnas.0606660103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  A functional connection between the pores of distantly related ion channels as revealed by mutant K+ channels.

Authors:  L Heginbotham; T Abramson; R MacKinnon
Journal:  Science       Date:  1992-11-13       Impact factor: 47.728

2.  The structure of the potassium channel: molecular basis of K+ conduction and selectivity.

Authors:  D A Doyle; J Morais Cabral; R A Pfuetzner; A Kuo; J M Gulbis; S L Cohen; B T Chait; R MacKinnon
Journal:  Science       Date:  1998-04-03       Impact factor: 47.728

3.  Nonselective and G betagamma-insensitive weaver K+ channels.

Authors:  B Navarro; M E Kennedy; B Velimirovíc; D Bhat; A S Peterson; D E Clapham
Journal:  Science       Date:  1996-06-28       Impact factor: 47.728

4.  Selectivity changes during activation of mutant Shaker potassium channels.

Authors:  J Zheng; F J Sigworth
Journal:  J Gen Physiol       Date:  1997-08       Impact factor: 4.086

5.  Stabilization of ion selectivity filter by pore loop ion pairs in an inwardly rectifying potassium channel.

Authors:  J Yang; M Yu; Y N Jan; L Y Jan
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

6.  Comparative protein modelling by satisfaction of spatial restraints.

Authors:  A Sali; T L Blundell
Journal:  J Mol Biol       Date:  1993-12-05       Impact factor: 5.469

7.  A single aspartate residue is involved in both intrinsic gating and blockage by Mg2+ of the inward rectifier, IRK1.

Authors:  P R Stanfield; N W Davies; P A Shelton; M J Sutcliffe; I A Khan; W J Brammar; E C Conley
Journal:  J Physiol       Date:  1994-07-01       Impact factor: 5.182

8.  Cloning provides evidence for a family of inward rectifier and G-protein coupled K+ channels in the brain.

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Journal:  FEBS Lett       Date:  1994-10-10       Impact factor: 4.124

9.  Control of rectification and permeation by residues in two distinct domains in an inward rectifier K+ channel.

Authors:  J Yang; Y N Jan; L Y Jan
Journal:  Neuron       Date:  1995-05       Impact factor: 17.173

10.  Ion conduction through C-type inactivated Shaker channels.

Authors:  J G Starkus; L Kuschel; M D Rayner; S H Heinemann
Journal:  J Gen Physiol       Date:  1997-11       Impact factor: 4.086

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  21 in total

Review 1.  Structural correlates of selectivity and inactivation in potassium channels.

Authors:  Jason G McCoy; Crina M Nimigean
Journal:  Biochim Biophys Acta       Date:  2011-09-16

2.  Charge at the lidocaine binding site residue Phe-1759 affects permeation in human cardiac voltage-gated sodium channels.

Authors:  Megan M McNulty; Gabrielle B Edgerton; Ravi D Shah; Dorothy A Hanck; Harry A Fozzard; Gregory M Lipkind
Journal:  J Physiol       Date:  2007-03-15       Impact factor: 5.182

3.  Tuning ion coordination architectures to enable selective partitioning.

Authors:  Sameer Varma; Susan B Rempe
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

4.  Ion conductance vs. pore gating and selectivity in KcsA channel: modeling achievements and perspectives.

Authors:  Céline Boiteux; Sebastian Kraszewski; Christophe Ramseyer; Claude Girardet
Journal:  J Mol Model       Date:  2007-04-06       Impact factor: 1.810

5.  A new approach to the selectivity of ion channels: nonlocal electrostatic consideration.

Authors:  A A Rubashkin; P Iserovich
Journal:  Dokl Biochem Biophys       Date:  2007 Nov-Dec       Impact factor: 0.788

6.  Changes in negative charge at the luminal mouth of the pore alter ion handling and gating in the cardiac ryanodine-receptor.

Authors:  Fiona C Mead-Savery; Ruiwu Wang; Bhavna Tanna-Topan; S R Wayne Chen; William Welch; Alan J Williams
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

7.  The membrane potential and its representation by a constant electric field in computer simulations.

Authors:  Benoît Roux
Journal:  Biophys J       Date:  2008-07-18       Impact factor: 4.033

8.  Model development for the viral Kcv potassium channel.

Authors:  Sascha Tayefeh; Thomas Kloss; Michael Kreim; Manuela Gebhardt; Dirk Baumeister; Brigitte Hertel; Christian Richter; Harald Schwalbe; Anna Moroni; Gerhard Thiel; Stefan M Kast
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

9.  Effect of diaminopropionic acid (Dap) on the biophysical properties of a modified synthetic channel-forming peptide.

Authors:  Urska Bukovnik; Monica Sala-Rabanal; Simonne Francis; Shawnalea J Frazier; Bruce D Schultz; Colin G Nichols; John M Tomich
Journal:  Mol Pharm       Date:  2013-09-23       Impact factor: 4.939

10.  K+/Na+ selectivity in K channels and valinomycin: over-coordination versus cavity-size constraints.

Authors:  Sameer Varma; Dubravko Sabo; Susan B Rempe
Journal:  J Mol Biol       Date:  2007-11-28       Impact factor: 5.469

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