Literature DB >> 16981675

Alpha-sheet: The toxic conformer in amyloid diseases?

Valerie Daggett1.   

Abstract

A novel secondary structure, the alpha-sheet, was identified through molecular dynamics (MD) simulations of various proteins associated with amyloid diseases under amyloidogenic conditions. The structure was first predicted by Pauling and Corey, and it has been directly observed in crystal structures of "nonnatural peptides". There are occurrences of alpha-strands and alpha-sheets in the Protein Data Bank, but they are rare. We propose that alpha-sheet is formed during the conformational changes associated with amyloidosis and that it may represent the toxic conformer. Here, structural properties of the alpha-sheet, background information, and experimental support for this novel structure are presented. Finally we speculate about the possible role of this conformation in disease.

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Year:  2006        PMID: 16981675     DOI: 10.1021/ar0500719

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  34 in total

1.  Supramolecular non-amyloid intermediates in the early stages of α-synuclein aggregation.

Authors:  Jonathan A Fauerbach; Dmytro A Yushchenko; Sarah H Shahmoradian; Wah Chiu; Thomas M Jovin; Elizabeth A Jares-Erijman
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Insights into Unfolded Proteins from the Intrinsic ϕ/ψ Propensities of the AAXAA Host-Guest Series.

Authors:  Clare-Louise Towse; Jiri Vymetal; Jiri Vondrasek; Valerie Daggett
Journal:  Biophys J       Date:  2016-01-19       Impact factor: 4.033

3.  Experimental characterization of disordered and ordered aggregates populated during the process of amyloid fibril formation.

Authors:  Natàlia Carulla; Min Zhou; Muriel Arimon; Margarida Gairí; Ernest Giralt; Carol V Robinson; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-28       Impact factor: 11.205

Review 4.  Computational simulations of the early steps of protein aggregation.

Authors:  Guanghong Wei; Normand Mousseau; Philippe Derreumaux
Journal:  Prion       Date:  2007-01-05       Impact factor: 3.931

5.  Peptides Composed of Alternating L- and D-Amino Acids Inhibit Amyloidogenesis in Three Distinct Amyloid Systems Independent of Sequence.

Authors:  Jackson Kellock; Gene Hopping; Byron Caughey; Valerie Daggett
Journal:  J Mol Biol       Date:  2016-03-21       Impact factor: 5.469

6.  Comparing the energy landscapes for native folding and aggregation of PrP.

Authors:  Derek R Dee; Michael T Woodside
Journal:  Prion       Date:  2016-05-03       Impact factor: 3.931

7.  Structural and dynamic properties of the human prion protein.

Authors:  Wei Chen; Marc W van der Kamp; Valerie Daggett
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

8.  Chemical and Physical Variability in Structural Isomers of an l/d α-Sheet Peptide Designed To Inhibit Amyloidogenesis.

Authors:  Nathan L Maris; Dylan Shea; Alissa Bleem; James D Bryers; Valerie Daggett
Journal:  Biochemistry       Date:  2017-12-19       Impact factor: 3.162

Review 9.  Protein three-dimensional structures at the origin of life.

Authors:  E James Milner-White
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

10.  Conformations of peptoids in nanosheets result from the interplay of backbone energetics and intermolecular interactions.

Authors:  John R Edison; Ryan K Spencer; Glenn L Butterfoss; Benjamin C Hudson; Allon I Hochbaum; Anant K Paravastu; Ronald N Zuckermann; Stephen Whitelam
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-14       Impact factor: 11.205

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