Literature DB >> 16981181

Non-parametric estimation of the case fatality ratio with competing risks data: an application to Severe Acute Respiratory Syndrome (SARS).

Nicholas P Jewell1, Xiudong Lei, Azra C Ghani, Christl A Donnelly, Gabriel M Leung, Lai-Ming Ho, Benjamin J Cowling, Anthony J Hedley.   

Abstract

For diseases with some level of associated mortality, the case fatality ratio measures the proportion of diseased individuals who die from the disease. In principle, it is straightforward to estimate this quantity from individual follow-up data that provides times from onset to death or recovery. In particular, in a competing risks context, the case fatality ratio is defined by the limiting value of the sub-distribution function, F(1)(t) = Pr(T <or=t and J = 1), associated with death, as t --> infinity, where T denotes the time from onset to death (J = 1) or recovery (J = 2). When censoring is present, however, estimation of F(1)(infinity) is complicated by the possibility of little information regarding the right tail of F(1), requiring use of estimators of F(1)(t(*)) or F(1)(t(*))/(F(1)(t(*))+F(2)(t(*))) where t(*) is large, with F(2)(t) = Pr(T <or=t and J = 2) being the analogous sub-distribution function associated with recovery. With right censored data, the variability of such estimators increases as t(*) increases, suggesting the possibility of using estimators at lower values of t(*) where bias may be increased but overall mean squared error be smaller. These issues are investigated here for non-parametric estimators of F(1) and F(2). The ideas are illustrated on case fatality data for individuals infected with Severe Acute Respiratory Syndrome (SARS) in Hong Kong in 2003.

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Year:  2007        PMID: 16981181      PMCID: PMC7169492          DOI: 10.1002/sim.2691

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  7 in total

Review 1.  Estimation of failure probabilities in the presence of competing risks: new representations of old estimators.

Authors:  T A Gooley; W Leisenring; J Crowley; B E Storer
Journal:  Stat Med       Date:  1999-03-30       Impact factor: 2.373

2.  Non-parametric confidence interval estimation for competing risks analysis: application to contraceptive data.

Authors:  Jahar B Choudhury
Journal:  Stat Med       Date:  2002-04-30       Impact factor: 2.373

3.  Non-parametric inference for cumulative incidence functions in competing risks studies.

Authors:  D Y Lin
Journal:  Stat Med       Date:  1997-04-30       Impact factor: 2.373

4.  The epidemiology of severe acute respiratory syndrome in the 2003 Hong Kong epidemic: an analysis of all 1755 patients.

Authors:  Gabriel M Leung; Anthony J Hedley; Lai-Ming Ho; Patsy Chau; Irene O L Wong; Thuan Q Thach; Azra C Ghani; Christl A Donnelly; Christophe Fraser; Steven Riley; Neil M Ferguson; Roy M Anderson; Thomas Tsang; Pak-Yin Leung; Vivian Wong; Jane C K Chan; Eva Tsui; Su-Vui Lo; Tai-Hing Lam
Journal:  Ann Intern Med       Date:  2004-11-02       Impact factor: 25.391

5.  Methods for estimating the case fatality ratio for a novel, emerging infectious disease.

Authors:  A C Ghani; C A Donnelly; D R Cox; J T Griffin; C Fraser; T H Lam; L M Ho; W S Chan; R M Anderson; A J Hedley; G M Leung
Journal:  Am J Epidemiol       Date:  2005-08-02       Impact factor: 4.897

6.  Severe acute respiratory syndrome: temporal stability and geographic variation in case-fatality rates and doubling times.

Authors:  Alison P Galvani; Xiudong Lei; Nicholas P Jewell
Journal:  Emerg Infect Dis       Date:  2003-08       Impact factor: 6.883

7.  Epidemiological determinants of spread of causal agent of severe acute respiratory syndrome in Hong Kong.

Authors:  Christl A Donnelly; Azra C Ghani; Gabriel M Leung; Anthony J Hedley; Christophe Fraser; Steven Riley; Laith J Abu-Raddad; Lai-Ming Ho; Thuan-Quoc Thach; Patsy Chau; King-Pan Chan; Tai-Hing Lam; Lai-Yin Tse; Thomas Tsang; Shao-Haei Liu; James H B Kong; Edith M C Lau; Neil M Ferguson; Roy M Anderson
Journal:  Lancet       Date:  2003-05-24       Impact factor: 79.321

  7 in total
  20 in total

1.  Estimating the case fatality rate using a constant cure-death hazard ratio.

Authors:  Zheng Chen; Kohei Akazawa; Tsuyoshi Nakamura
Journal:  Lifetime Data Anal       Date:  2009-05-21       Impact factor: 1.588

2.  On pseudo-values for regression analysis in competing risks models.

Authors:  Frederik Graw; Thomas A Gerds; Martin Schumacher
Journal:  Lifetime Data Anal       Date:  2008-12-03       Impact factor: 1.588

3.  Comparative epidemiology of human infections with avian influenza A H7N9 and H5N1 viruses in China: a population-based study of laboratory-confirmed cases.

Authors:  Benjamin J Cowling; Lianmei Jin; Eric H Y Lau; Qiaohong Liao; Peng Wu; Hui Jiang; Tim K Tsang; Jiandong Zheng; Vicky J Fang; Zhaorui Chang; Michael Y Ni; Qian Zhang; Dennis K M Ip; Jianxing Yu; Yu Li; Liping Wang; Wenxiao Tu; Ling Meng; Joseph T Wu; Huiming Luo; Qun Li; Yuelong Shu; Zhongjie Li; Zijian Feng; Weizhong Yang; Yu Wang; Gabriel M Leung; Hongjie Yu
Journal:  Lancet       Date:  2013-06-24       Impact factor: 79.321

4.  Estimation with Right-Censored Observations Under A Semi-Markov Model.

Authors:  Lihui Zhao; X Joan Hu
Journal:  Can J Stat       Date:  2013-06       Impact factor: 0.875

5.  The time required to estimate the case fatality ratio of influenza using only the tip of an iceberg: joint estimation of the virulence and the transmission potential.

Authors:  Keisuke Ejima; Ryosuke Omori; Benjamin J Cowling; Kazuyuki Aihara; Hiroshi Nishiura
Journal:  Comput Math Methods Med       Date:  2012-05-10       Impact factor: 2.238

6.  Real-time characterization of risks of death associated with the Middle East respiratory syndrome (MERS) in the Republic of Korea, 2015.

Authors:  Kenji Mizumoto; Akira Endo; Gerardo Chowell; Yuichiro Miyamatsu; Masaya Saitoh; Hiroshi Nishiura
Journal:  BMC Med       Date:  2015-09-30       Impact factor: 8.775

7.  Estimating absolute and relative case fatality ratios from infectious disease surveillance data.

Authors:  Nicholas G Reich; Justin Lessler; Derek A T Cummings; Ron Brookmeyer
Journal:  Biometrics       Date:  2012-01-25       Impact factor: 2.571

Review 8.  Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks.

Authors:  Marc Lipsitch; Christl A Donnelly; Christophe Fraser; Isobel M Blake; Anne Cori; Ilaria Dorigatti; Neil M Ferguson; Tini Garske; Harriet L Mills; Steven Riley; Maria D Van Kerkhove; Miguel A Hernán
Journal:  PLoS Negl Trop Dis       Date:  2015-07-16

9.  Early epidemiological assessment of the virulence of emerging infectious diseases: a case study of an influenza pandemic.

Authors:  Hiroshi Nishiura; Don Klinkenberg; Mick Roberts; Johan A P Heesterbeek
Journal:  PLoS One       Date:  2009-08-31       Impact factor: 3.240

10.  Case fatality risk of novel coronavirus diseases 2019 in China.

Authors:  Xiaowei Deng; Juan Yang; Wei Wang; Xiling Wang; Jiaxin Zhou; Zhiyuan Chen; Jing Li; Yinzi Chen; Han Yan; Juanjuan Zhang; Yongli Zhang; Yan Wang; Qi Qiu; Hui Gong; Xianglin Wei; Lili Wang; Kaiyuan Sun; Peng Wu; Marco Ajelli; Benjamin J Cowling; Cecile Viboud; Hongjie Yu
Journal:  medRxiv       Date:  2020-03-06
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