Literature DB >> 16970386

Estimates of the energy of intramolecular hydrogen bonds.

Mirosław Jabłoński1, Anna Kaczmarek, Andrzej J Sadlej.   

Abstract

A method for the estimation of the energy of intramolecular hydrogen bonds in conjugated systems existing in a variety of conformations is presented. The method is applied to determine the intramolecular hydrogen bond energy in 3-aminopropenal and 3-aminopropenthial. According to the proposed estimation scheme, the intramolecular H-bond energies are found to be of the order of 5-7 kcal/mol. These results are compared with those obtained by using other estimation schemes as well as with the recent results by other authors. Also, the H-bond energies in dimers and trimers of the two molecules are calculated and compared with the corresponding data for internally hydrogen-bonded monomers. This comparison shows that the bond equalization effect is primarily due to proton donor-proton acceptor proximity. In comparison with intermolecular hydrogen bonds, the rigidity of the chelate skeleton enhances this proximity effect. The same effect can be seen in systems with intermolecular hydrogen bonds, although its magnitude is diminished because of the absence of additional forces which pull the proton donor and proton acceptor groups toward each other. No specific resonance-assisted origin of the intramolecular hydrogen bond energy seems to be needed to elucidate the energetics of these bonds.

Entities:  

Year:  2006        PMID: 16970386     DOI: 10.1021/jp062759o

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  14 in total

1.  Stabilizing factors of the molecular structure in silicon-based peptidomimetics in gas-phase and water solution. Assessment of the correlation between different descriptors of hydrogen bond strength.

Authors:  María Pilar Gema Rodríguez Ortega; Manuel Montejo; Juan Jesús López González
Journal:  J Mol Model       Date:  2013-07-31       Impact factor: 1.810

2.  Interference of H-bonding and substituent effects in nitro- and hydroxy-substituted salicylaldehydes.

Authors:  Aneta Jezierska-Mazzarello; Halina Szatyłowicz; Tadeusz Marek Krygowski
Journal:  J Mol Model       Date:  2011-04-27       Impact factor: 1.810

Review 3.  Transition Metal Catalysis Controlled by Hydrogen Bonding in the Second Coordination Sphere.

Authors:  Joost N H Reek; Bas de Bruin; Sonja Pullen; Tiddo J Mooibroek; Alexander M Kluwer; Xavier Caumes
Journal:  Chem Rev       Date:  2022-05-20       Impact factor: 72.087

4.  Development of a novel bioinformatics tool for in silico validation of protein interactions.

Authors:  Nicola Barbarini; Luca Simonelli; Alberto Azzalin; Sergio Comincini; Riccardo Bellazzi
Journal:  J Biomed Biotechnol       Date:  2010-06-07

5.  The Role of Hydrogen Bonds in Interactions between [PdCl4]2- Dianions in Crystal.

Authors:  Rafał Wysokiński; Wiktor Zierkiewicz; Mariusz Michalczyk; Thierry Maris; Steve Scheiner
Journal:  Molecules       Date:  2022-03-26       Impact factor: 4.411

6.  Intramolecular charge-assisted hydrogen bond strength in pseudochair carboxyphosphate.

Authors:  Sarah E Kochanek; Traci M Clymer; Venkata S Pakkala; Sebastien P Hebert; Kyle Reeping; Steven M Firestine; Jeffrey D Evanseck
Journal:  J Phys Chem B       Date:  2014-12-04       Impact factor: 2.991

7.  Nature of Intramolecular Resonance Assisted Hydrogen Bonding in Malonaldehyde and Its Saturated Analogue.

Authors:  Alice A Grosch; Stephanie C C van der Lubbe; Célia Fonseca Guerra
Journal:  J Phys Chem A       Date:  2018-02-02       Impact factor: 2.781

8.  Intramolecular Hydrogen Bonding and Conformational Preferences of Arzanol-An Antioxidant Acylphloroglucinol.

Authors:  Liliana Mammino
Journal:  Molecules       Date:  2017-08-03       Impact factor: 4.411

9.  Carbohydrate Self-Assembly at Surfaces: STM Imaging of Sucrose Conformation and Ordering on Cu(100).

Authors:  Sabine Abb; Nathalie Tarrat; Juan Cortés; Bohdan Andriyevsky; Ludger Harnau; J Christian Schön; Stephan Rauschenbach; Klaus Kern
Journal:  Angew Chem Int Ed Engl       Date:  2019-05-24       Impact factor: 15.336

Review 10.  Molecular Tailoring Approach for the Estimation of Intramolecular Hydrogen Bond Energy.

Authors:  Milind M Deshmukh; Shridhar R Gadre
Journal:  Molecules       Date:  2021-05-14       Impact factor: 4.411

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