Literature DB >> 16957984

Molecular interactions involving Escherichia coli nucleoside diphosphate kinase.

Rongkun Shen1, Linda J Wheeler, Christopher K Mathews.   

Abstract

Nucleoside diphosphate kinase plays a distinctive metabolic role as the enzyme poised between the last reaction of deoxyribonucleoside triphosphate (dNTP) biosynthesis and the DNA polymerization apparatus. In bacteriophage T4 infection, NDP kinase is one of very few enzymes of host cell origin to participate in either dNTP synthesis or DNA replication. Yet NDP kinase forms specific contacts with phage-coded proteins of dNTP and DNA synthesis. This article summarizes work from our laboratory that identifies and characterizes these interactions. Despite these specific interactions, the enzyme appears to be dispensable, both for T4 replication and for growth of the host, Escherichia coli, because site-specific disruption of ndk, the structural gene for NDP kinase, does not interfere with growth of the host cell and only partly inhibits phage replication. However, ndk disruption unbalances the dNTP pools and stimulates mutagenesis. We discuss our attempts to understand the basis for this enhanced mutagenesis.

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Year:  2006        PMID: 16957984     DOI: 10.1007/s10863-006-9041-2

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  21 in total

Review 1.  Quaternary structure of nucleoside diphosphate kinases.

Authors:  L Lascu; A Giartosio; S Ransac; M Erent
Journal:  J Bioenerg Biomembr       Date:  2000-06       Impact factor: 2.945

2.  Protein-DNA interactions in the T4 dNTP synthetase complex dependent on gene 32 single-stranded DNA-binding protein.

Authors:  Juhyun Kim; Linda J Wheeler; Rongkun Shen; Christopher K Mathews
Journal:  Mol Microbiol       Date:  2005-03       Impact factor: 3.501

3.  Adenylate kinase complements nucleoside diphosphate kinase deficiency in nucleotide metabolism.

Authors:  Q Lu; M Inouye
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-11       Impact factor: 11.205

4.  Stimulation of mutagenesis by proportional deoxyribonucleoside triphosphate accumulation in Escherichia coli.

Authors:  Linda J Wheeler; Indira Rajagopal; Christopher K Mathews
Journal:  DNA Repair (Amst)       Date:  2005-10-03

5.  T4 phage gene 32 protein as a candidate organizing factor for the deoxyribonucleoside triphosphate synthetase complex.

Authors:  L J Wheeler; N B Ray; C Ungermann; S P Hendricks; M A Bernard; E S Hanson; C K Mathews
Journal:  J Biol Chem       Date:  1996-05-10       Impact factor: 5.157

6.  T4 phage deoxyribonucleotide-synthesizing enzyme complex. Further studies on enzyme composition and regulation.

Authors:  J R Allen; G W Lasser; D A Goldman; J W Booth; C K Mathews
Journal:  J Biol Chem       Date:  1983-05-10       Impact factor: 5.157

7.  Effects of T4 phage infection and anaerobiosis upon nucleotide pools and mutagenesis in nucleoside diphosphokinase-defective Escherichia coli strains.

Authors:  X Zhang; Q Lu; M Inouye; C K Mathews
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

8.  Analytical sedimentation studies of turkey gizzard myosin light chain kinase and telokin.

Authors:  J Ausio; D A Malencik; S R Anderson
Journal:  Biophys J       Date:  1992-06       Impact factor: 4.033

9.  Escherichia coli strains (ndk) lacking nucleoside diphosphate kinase are powerful mutators for base substitutions and frameshifts in mismatch-repair-deficient strains.

Authors:  Jeffrey H Miller; Pauline Funchain; Wendy Clendenin; Tiffany Huang; Anh Nguyen; Erika Wolff; Annie Yeung; Ju-Huei Chiang; Lilit Garibyan; Malgorzata M Slupska; Hanjing Yang
Journal:  Genetics       Date:  2002-09       Impact factor: 4.562

10.  The gene for nucleoside diphosphate kinase functions as a mutator gene in Escherichia coli.

Authors:  Q Lu; X Zhang; N Almaula; C K Mathews; M Inouye
Journal:  J Mol Biol       Date:  1995-12-01       Impact factor: 5.469

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  7 in total

1.  Insights into mutagenesis using Escherichia coli chromosomal lacZ strains that enable detection of a wide spectrum of mutational events.

Authors:  Tracey Seier; Dana R Padgett; Gal Zilberberg; Vincent A Sutera; Noor Toha; Susan T Lovett
Journal:  Genetics       Date:  2011-03-24       Impact factor: 4.562

2.  Escherichia coli nucleoside diphosphate kinase mutants depend on translesion DNA synthesis to prevent mutagenesis.

Authors:  Jared Nordman; Andrew Wright
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

Review 3.  Learning about the functions of NME/NM23: lessons from knockout mice to silencing strategies.

Authors:  Mathieu Boissan; Marie-Lise Lacombe
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2011-05-12       Impact factor: 3.000

4.  Nucleoside Diphosphate Kinase Escalates A-to-C Mutations in MutT-Deficient Strains of Escherichia coli.

Authors:  Indu Kapoor; Elhassan Ali Fathi Emam; Abhirup Shaw; Umesh Varshney
Journal:  J Bacteriol       Date:  2019-12-06       Impact factor: 3.490

5.  YNK1, the yeast homolog of human metastasis suppressor NM23, is required for repair of UV radiation- and etoposide-induced DNA damage.

Authors:  Mengmeng Yang; Stuart G Jarrett; Rolf Craven; David M Kaetzel
Journal:  Mutat Res       Date:  2008-10-15       Impact factor: 2.433

6.  The relationship between dNTP pool levels and mutagenesis in an Escherichia coli NDP kinase mutant.

Authors:  Jared Nordman; Andrew Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-10       Impact factor: 11.205

Review 7.  Structure, Folding and Stability of Nucleoside Diphosphate Kinases.

Authors:  Florian Georgescauld; Yuyu Song; Alain Dautant
Journal:  Int J Mol Sci       Date:  2020-09-16       Impact factor: 5.923

  7 in total

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