Literature DB >> 16957191

Transcriptional organization and regulation of magnetosome operons in Magnetospirillum gryphiswaldense.

Sabrina Schübbe1, Chris Würdemann, Jörg Peplies, Udo Heyen, Cathrin Wawer, Frank Oliver Glöckner, Dirk Schüler.   

Abstract

Genes involved in magnetite biomineralization are clustered within the genomic magnetosome island of Magnetospirillum gryphiswaldense. Their transcriptional organization and regulation were studied by several approaches. Cotranscription of genes within the mamAB, mamDC, and mms clusters was demonstrated by reverse transcription-PCR (RT-PCR) of intergenic regions, indicating the presence of long polycistronic transcripts extending over more than 16 kb. The transcription start points of the mamAB, mamDC, and mms operons were mapped at 22 bp, 52 bp, and 58 bp upstream of the first genes of the operons, respectively. Identified -10 and -35 boxes of the P(mamAB), P(mamDC), and P(mms) promoters showed high similarity to the canonical sigma(70) recognition sequence. The transcription of magnetosome genes was further studied in response to iron and oxygen. Transcripts of magnetosome genes were detected by RT-PCR both in magnetic cells grown microaerobically under iron-sufficient conditions and in nonmagnetic cells grown either aerobically or with iron limitation. The presence of transcripts was found to be independent of the growth phase. Further results from partial RNA microarrays targeting the putative magnetosome transcriptome of M. gryphiswaldense and real-time RT-PCR experiments indicated differences in expression levels depending on growth conditions. The expression of the mam and mms genes was down-regulated in nonmagnetic cells under iron limitation and, to a lesser extent, during aerobic growth compared to that in magnetite-forming cells grown microaerobically under iron-sufficient conditions.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16957191      PMCID: PMC1563640          DOI: 10.1128/AEM.00201-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  33 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

Review 2.  Messenger RNA stability and its role in control of gene expression in bacteria and phages.

Authors:  M Grunberg-Manago
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

3.  Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data.

Authors:  Christian Ramakers; Jan M Ruijter; Ronald H Lekanne Deprez; Antoon F M Moorman
Journal:  Neurosci Lett       Date:  2003-03-13       Impact factor: 3.046

4.  Iron-limited growth and kinetics of iron uptake in Magnetospirillum gryphiswaldense.

Authors:  D Schüler; E Baeuerlein
Journal:  Arch Microbiol       Date:  1996-11       Impact factor: 2.552

5.  Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes.

Authors:  Jörg Peplies; Frank Oliver Glöckner; Rudolf Amann
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

6.  Galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products.

Authors:  Katy Vaillancourt; Sylvain Moineau; Michel Frenette; Christian Lessard; Christian Vadeboncoeur
Journal:  J Bacteriol       Date:  2002-02       Impact factor: 3.490

7.  Transcriptional organization of the erythromycin biosynthetic gene cluster of Saccharopolyspora erythraea.

Authors:  A R Reeves; R S English; J S Lampel; D A Post; T J Vanden Boom
Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

8.  A large gene cluster encoding several magnetosome proteins is conserved in different species of magnetotactic bacteria.

Authors:  K Grünberg; C Wawer; B M Tebo; D Schüler
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

9.  RNase III processing of intervening sequences found in helix 9 of 23S rRNA in the alpha subclass of Proteobacteria.

Authors:  E Evguenieva-Hackenberg; G Klug
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

10.  Growth and magnetosome formation by microaerophilic Magnetospirillum strains in an oxygen-controlled fermentor.

Authors:  U Heyen; D Schüler
Journal:  Appl Microbiol Biotechnol       Date:  2003-02-20       Impact factor: 4.813

View more
  23 in total

Review 1.  From invagination to navigation: The story of magnetosome-associated proteins in magnetotactic bacteria.

Authors:  Shiran Barber-Zucker; Noa Keren-Khadmy; Raz Zarivach
Journal:  Protein Sci       Date:  2015-11-03       Impact factor: 6.725

2.  Polymerization of the actin-like protein MamK, which is associated with magnetosomes.

Authors:  Azuma Taoka; Ryuji Asada; Long-Fei Wu; Yoshihiro Fukumori
Journal:  J Bacteriol       Date:  2007-09-28       Impact factor: 3.490

3.  The acidic repetitive domain of the Magnetospirillum gryphiswaldense MamJ protein displays hypervariability but is not required for magnetosome chain assembly.

Authors:  André Scheffel; Dirk Schüler
Journal:  J Bacteriol       Date:  2007-06-29       Impact factor: 3.490

4.  Complete genome sequence of the chemolithoautotrophic marine magnetotactic coccus strain MC-1.

Authors:  Sabrina Schübbe; Timothy J Williams; Gary Xie; Hajnalka E Kiss; Thomas S Brettin; Diego Martinez; Christian A Ross; Dirk Schüler; B Lea Cox; Kenneth H Nealson; Dennis A Bazylinski
Journal:  Appl Environ Microbiol       Date:  2009-05-22       Impact factor: 4.792

Review 5.  Ecology, diversity, and evolution of magnetotactic bacteria.

Authors:  Christopher T Lefèvre; Dennis A Bazylinski
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

Review 6.  Formation of magnetite by bacteria and its application.

Authors:  Atsushi Arakaki; Hidekazu Nakazawa; Michiko Nemoto; Tetsushi Mori; Tadashi Matsunaga
Journal:  J R Soc Interface       Date:  2008-09-06       Impact factor: 4.118

7.  Cre-lox-based method for generation of large deletions within the genomic magnetosome island of Magnetospirillum gryphiswaldense.

Authors:  Susanne Ullrich; Dirk Schüler
Journal:  Appl Environ Microbiol       Date:  2010-02-19       Impact factor: 4.792

8.  Frequent mutations within the genomic magnetosome island of Magnetospirillum gryphiswaldense are mediated by RecA.

Authors:  Isabel Kolinko; Christian Jogler; Emanuel Katzmann; Dirk Schüler
Journal:  J Bacteriol       Date:  2011-08-05       Impact factor: 3.490

9.  Biosynthesis of magnetic nanostructures in a foreign organism by transfer of bacterial magnetosome gene clusters.

Authors:  Isabel Kolinko; Anna Lohße; Sarah Borg; Oliver Raschdorf; Christian Jogler; Qiang Tu; Mihály Pósfai; Eva Tompa; Jürgen M Plitzko; Andreas Brachmann; Gerhard Wanner; Rolf Müller; Youming Zhang; Dirk Schüler
Journal:  Nat Nanotechnol       Date:  2014-02-23       Impact factor: 39.213

10.  Genetic dissection of the mamAB and mms6 operons reveals a gene set essential for magnetosome biogenesis in Magnetospirillum gryphiswaldense.

Authors:  Anna Lohße; Sarah Borg; Oliver Raschdorf; Isabel Kolinko; Eva Tompa; Mihály Pósfai; Damien Faivre; Jens Baumgartner; Dirk Schüler
Journal:  J Bacteriol       Date:  2014-05-09       Impact factor: 3.490

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.