Literature DB >> 16956323

Biodiversity informatics.

Norman F Johnson1.   

Abstract

Biodiversity informatics is an emerging field that applies information management tools to the management and analysis of species-occurrence, taxonomic character, and image data. A wide and growing range of tools is available for both curators and researchers. The development and implementation of formal data exchange standards and query protocols have made it possible to integrate data holdings from collections around the world. The current technological environment is summarized; protocols, standards, and tools for data management, sharing, and integration are reviewed; and methods and tools for analyzing species-occurrence and character data are examined. Direct access to primary data and imagery has the power to transform the means by which taxonomy is practiced and its results disseminated to the general community.

Mesh:

Year:  2007        PMID: 16956323     DOI: 10.1146/annurev.ento.52.110405.091259

Source DB:  PubMed          Journal:  Annu Rev Entomol        ISSN: 0066-4170            Impact factor:   19.686


  5 in total

1.  NeXML: rich, extensible, and verifiable representation of comparative data and metadata.

Authors:  Rutger A Vos; James P Balhoff; Jason A Caravas; Mark T Holder; Hilmar Lapp; Wayne P Maddison; Peter E Midford; Anurag Priyam; Jeet Sukumaran; Xuhua Xia; Arlin Stoltzfus
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

2.  The geospatial data quality REST API for primary biodiversity data.

Authors:  Javier Otegui; Robert P Guralnick
Journal:  Bioinformatics       Date:  2016-02-01       Impact factor: 6.937

3.  Integrating specimen databases and revisionary systematics.

Authors:  Randall T Schuh
Journal:  Zookeys       Date:  2012-07-20       Impact factor: 1.546

4.  InvertNet: a new paradigm for digital access to invertebrate collections.

Authors:  Chris Dietrich; John Hart; David Raila; Umberto Ravaioli; Nahil Sobh; Omar Sobh; Chris Taylor
Journal:  Zookeys       Date:  2012-07-20       Impact factor: 1.546

5.  Assessing the primary data hosted by the Spanish node of the Global Biodiversity Information Facility (GBIF).

Authors:  Javier Otegui; Arturo H Ariño; María A Encinas; Francisco Pando
Journal:  PLoS One       Date:  2013-01-25       Impact factor: 3.240

  5 in total

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