Literature DB >> 16955112

Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegans.

E W Gutteling1, J A G Riksen, J Bakker, J E Kammenga.   

Abstract

Phenotypic plasticity and genotype-environment interactions (GEI) play an important role in the evolution of life histories. Knowledge of the molecular genetic basis of plasticity and GEI provides insight into the underlying mechanisms of life-history changes in different environments. We used a genomewide single-nucleotide polymorphism map in a recombinant N2 x CB4856 inbred panel of the nematode Caenorhabditis elegans to study the genetic control of phenotypic plasticity to temperature in four fitness-related traits, that is, age at maturity, fertility, egg size and growth rate. We mapped quantitative trait loci (QTL) for the respective traits at 12 and 24 degrees C, as well as their plasticities. We found genetic variation and GEI for age at maturity, fertility, egg size and growth rate. GEI in fertility and egg size was attributed to changes in rank order of reaction norms. In case of age at maturity and growth rate, GEI was caused mainly by differences in the among-line variance. In total, 11 QTLs were detected, five QTL at 12 degrees C and six QTL at 24 degrees C, which were associated with life-history traits. Five QTL associated with age at maturity, fertility and growth rate showed QTL x environment interaction. These colocalized with plasticity QTL for the respective traits suggesting allelic sensitivity to temperature. Further fine mapping, complementation analyses and gene silencing are planned to identify candidate genes underlying phenotypic plasticity for age at maturity, fertility and growth.

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Year:  2006        PMID: 16955112     DOI: 10.1038/sj.hdy.6800894

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  56 in total

1.  Juvenile exposure to predator cues induces a larger egg size in fish.

Authors:  Francisca H I D Segers; Barbara Taborsky
Journal:  Proc Biol Sci       Date:  2011-10-05       Impact factor: 5.349

2.  Genome-wide gene expression regulation as a function of genotype and age in C. elegans.

Authors:  Ana Viñuela; L Basten Snoek; Joost A G Riksen; Jan E Kammenga
Journal:  Genome Res       Date:  2010-05-20       Impact factor: 9.043

3.  Quantitative trait loci affecting phenotypic plasticity and the allometric relationship of ovariole number and thorax length in Drosophila melanogaster.

Authors:  Alan O Bergland; Anne Genissel; Sergey V Nuzhdin; Marc Tatar
Journal:  Genetics       Date:  2008-08-20       Impact factor: 4.562

4.  The effects of genetic variation on gene expression dynamics during development.

Authors:  Mirko Francesconi; Ben Lehner
Journal:  Nature       Date:  2013-11-24       Impact factor: 49.962

5.  A statistical model for testing the pleiotropic control of phenotypic plasticity for a count trait.

Authors:  Chang-Xing Ma; Qibin Yu; Arthur Berg; Derek Drost; Evandro Novaes; Guifang Fu; John Stephen Yap; Aixin Tan; Matias Kirst; Yuehua Cui; Rongling Wu
Journal:  Genetics       Date:  2008-05       Impact factor: 4.562

6.  Quantitative trait loci mapping of phenotypic plasticity and genotype-environment interactions in plant and insect performance.

Authors:  C Tétard-Jones; M A Kertesz; R F Preziosi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-05-12       Impact factor: 6.237

Review 7.  Does your gene need a background check? How genetic background impacts the analysis of mutations, genes, and evolution.

Authors:  Christopher H Chandler; Sudarshan Chari; Ian Dworkin
Journal:  Trends Genet       Date:  2013-02-28       Impact factor: 11.639

8.  Whole genome sequencing highlights genetic changes associated with laboratory domestication of C. elegans.

Authors:  Katherine P Weber; Subhajyoti De; Iwanka Kozarewa; Daniel J Turner; M Madan Babu; Mario de Bono
Journal:  PLoS One       Date:  2010-11-11       Impact factor: 3.240

9.  The Drosophila foraging gene mediates adult plasticity and gene-environment interactions in behaviour, metabolites, and gene expression in response to food deprivation.

Authors:  Clement F Kent; Tim Daskalchuk; Lisa Cook; Marla B Sokolowski; Ralph J Greenspan
Journal:  PLoS Genet       Date:  2009-08-21       Impact factor: 5.917

10.  A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.

Authors:  Agnieszka Doroszuk; L Basten Snoek; Emilie Fradin; Joost Riksen; Jan Kammenga
Journal:  Nucleic Acids Res       Date:  2009-06-19       Impact factor: 16.971

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