Literature DB >> 16954297

Invader plus method detects herpes simplex virus in cerebrospinal fluid and simultaneously differentiates types 1 and 2.

Hatim T Allawi1, Haijing Li, Tamara Sander, Azamat Aslanukov, Victor I Lyamichev, Amondrea Blackman, Slava Elagin, Yi-Wei Tang.   

Abstract

We report here on the development and validation of a prototype Invader Plus method for the qualitative detection of herpes simplex virus types 1 and 2 in cerebrospinal fluid (CSF). The method combines PCR and Invader techniques in a single, closed-tube, continuous-reaction format that gives an analytical sensitivity of approximately 10 copies per reaction. The clinical sensitivity and specificity were 100.0% and 98.6%, respectively, when the results of the method were validated against the results obtained with a PCR colorimetric microtiter plate system by use of clinical CSF specimens.

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Year:  2006        PMID: 16954297      PMCID: PMC1594729          DOI: 10.1128/JCM.01175-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  24 in total

1.  Detection of herpes simplex virus DNA in genital and dermal specimens by LightCycler PCR after extraction using the IsoQuick, MagNA Pure, and BioRobot 9604 methods.

Authors:  M J Espy; P N Rys; A D Wold; J R Uhl; L M Sloan; G D Jenkins; D M Ilstrup; F R Cockerill; R Patel; J E Rosenblatt; T F Smith
Journal:  J Clin Microbiol       Date:  2001-06       Impact factor: 5.948

2.  Diagnosis of herpes simplex virus infections in the clinical laboratory by LightCycler PCR.

Authors:  M J Espy; J R Uhl; P S Mitchell; J N Thorvilson; K A Svien; A D Wold; T F Smith
Journal:  J Clin Microbiol       Date:  2000-02       Impact factor: 5.948

Review 3.  Molecular approaches to detecting herpes simplex virus and enteroviruses in the central nervous system.

Authors:  Thomas W Smalling; Susan E Sefers; Haijing Li; Yi-Wei Tang
Journal:  J Clin Microbiol       Date:  2002-07       Impact factor: 5.948

4.  Failure to genotype herpes simplex virus by real-time PCR assay and melting curve analysis due to sequence variation within probe binding sites.

Authors:  Trevor P Anderson; Anja M Werno; Kirsten A Beynon; David R Murdoch
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

5.  Rapid detection of herpes simplex virus and varicella-zoster virus infections by real-time PCR.

Authors:  Manfred Weidmann; Ursula Meyer-König; Frank T Hufert
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

6.  Effective use of polymerase chain reaction for diagnosis of central nervous system infections.

Authors:  Y W Tang; J R Hibbs; K R Tau; Q Qian; H A Skarhus; T F Smith; D H Persing
Journal:  Clin Infect Dis       Date:  1999-10       Impact factor: 9.079

7.  Experimental and theoretical analysis of the invasive signal amplification reaction.

Authors:  V I Lyamichev; M W Kaiser; N E Lyamicheva; A V Vologodskii; J G Hall; W P Ma; H T Allawi; B P Neri
Journal:  Biochemistry       Date:  2000-08-08       Impact factor: 3.162

8.  Parallel detection of five human herpes virus DNAs by a set of real-time polymerase chain reactions in a single run.

Authors:  Markus Stöcher; Victoria Leb; Michael Bozic; Harald H Kessler; Gabriele Halwachs-Baumann; Olfert Landt; Herbert Stekel; Jörg Berg
Journal:  J Clin Virol       Date:  2003-01       Impact factor: 3.168

9.  Detection and typing of HSV-1, HSV-2, and VZV by a multiplex polymerase chain reaction.

Authors:  P Markoulatos; A Georgopoulou; C Kotsovassilis; P Karabogia-Karaphillides; N Spyrou
Journal:  J Clin Lab Anal       Date:  2000       Impact factor: 2.352

Review 10.  Use of PCR for the diagnosis of herpesvirus infections of the central nervous system.

Authors:  Roberta L DeBiasi; B K Kleinschmidt-DeMasters; Adriana Weinberg; Kenneth L Tyler
Journal:  J Clin Virol       Date:  2002-07       Impact factor: 3.168

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  4 in total

Review 1.  Double strand binding-single strand incision mechanism for human flap endonuclease: implications for the superfamily.

Authors:  Susan E Tsutakawa; John A Tainer
Journal:  Mech Ageing Dev       Date:  2012-01-08       Impact factor: 5.432

Review 2.  Unpairing and gating: sequence-independent substrate recognition by FEN superfamily nucleases.

Authors:  Jane A Grasby; L David Finger; Susan E Tsutakawa; John M Atack; John A Tainer
Journal:  Trends Biochem Sci       Date:  2011-11-24       Impact factor: 13.807

3.  A real-time PCR assay to identify and discriminate among wild-type and vaccine strains of varicella-zoster virus and herpes simplex virus in clinical specimens, and comparison with the clinical diagnoses.

Authors:  Ruth Harbecke; Michael N Oxman; Beth A Arnold; Charlotte Ip; Gary R Johnson; Myron J Levin; Lawrence D Gelb; Kenneth E Schmader; Stephen E Straus; Hui Wang; Peter F Wright; Constance T Pachucki; Anne A Gershon; Robert D Arbeit; Larry E Davis; Michael S Simberkoff; Adriana Weinberg; Heather M Williams; Carol Cheney; Luba Petrukhin; Katalin G Abraham; Alan Shaw; Susan Manoff; Joseph M Antonello; Tina Green; Yue Wang; Charles Tan; Paul M Keller
Journal:  J Med Virol       Date:  2009-07       Impact factor: 2.327

Review 4.  Amplification chemistries in clinical virology.

Authors:  Sherry Dunbar; Shubhagata Das
Journal:  J Clin Virol       Date:  2019-03-27       Impact factor: 3.168

  4 in total

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