Literature DB >> 16953430

Cytological diploidization and rapid genome changes of the newly synthesized allotetraploids Cucumis x hytivus.

Longzheng Chen1, Qunfeng Lou, Yong Zhuang, Jinfeng Chen, Xiaoqing Zhang, Joseph N Wolukau.   

Abstract

We used a newly synthesized allotetraploid between C. sativus (2n = 2x = 14, n gametic chromosome number, x haploid chromosome number) and C. hystrix (2n = 2x = 24) to study the genomic events in its early generations. Results from cytological characterization of the F(1) and the allotetraploid progenies showed that the rate of bivalents in meiotic metaphase I of the F(1) was greatly improved by chromosome doubling, and further improved during the selfing process of allopolyploid resulting into relatively diploid-like meiosis. Extensive genomic changes were detected by amplified fragment length polymorphism analysis. The changes mainly involved loss of parental restriction fragments and gaining of novel fragments. The total detectable changes were from 11.1 to 32.1%, and the frequency of losing parental fragments was much higher than that of gaining novel fragments. Some of the changes were initiated as early as in the F(1) hybrid, whereas others occurred after chromosome doubling (polyploid formation). No significant differences were detected in the reciprocal F(1) hybrids and S(0) generations. But the data showed that the frequency of sequence losing in C. sativus was about two times higher than in the C. hystrix. Our results demonstrated that the sequence elimination was the major event of genomic changes, and it might provide the physical basis for the diploid-like meiotic behavior in the diploidization of the newly formed allopolyploids. Moreover, the results suggest that the sequence elimination was not caused by cytoplasmic factors, and might relate to genomic recombination and to the numbers of parental chromosome.

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Year:  2006        PMID: 16953430     DOI: 10.1007/s00425-006-0381-2

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  34 in total

1.  Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat.

Authors:  H Shaked; K Kashkush; H Ozkan; M Feldman; A A Levy
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

2.  Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms.

Authors:  J Masterson
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

3.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

4.  Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution.

Authors:  K Song; P Lu; K Tang; T C Osborn
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

Review 5.  The dynamic nature of polyploid genomes.

Authors:  D E Soltis; P S Soltis
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-29       Impact factor: 11.205

6.  Rapid isolation of high molecular weight plant DNA.

Authors:  M G Murray; W F Thompson
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

7.  Protein-coding genes are epigenetically regulated in Arabidopsis polyploids.

Authors:  H S Lee; Z J Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-22       Impact factor: 11.205

8.  Reproduction and cytogenetic characterization of interspecific hybrids derived from Cucumis hystrix Chakr. x Cucumis sativus L.

Authors:  J Chen; J Staub; Ch Qian; J Jiang; X Luo; F Zhuang
Journal:  Theor Appl Genet       Date:  2003-01-28       Impact factor: 5.699

9.  Physical mapping of ribosomal DNA sites in Festuca arundinacea and related species by in situ hybridization.

Authors:  H M Thomas; J A Harper; M R Meredith; W G Morgan; I P King
Journal:  Genome       Date:  1997-06       Impact factor: 2.166

10.  Comparative genome mapping of Sorghum and maize.

Authors:  R Whitkus; J Doebley; M Lee
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

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  17 in total

1.  Expression and sequence variation of the cucumber Por gene in the synthesized allotetraploid Cucumis x hytivus.

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2.  The origin of the C-genome and cytoplasm of Avena polyploids.

Authors:  N Nikoloudakis; A Katsiotis
Journal:  Theor Appl Genet       Date:  2008-05-08       Impact factor: 5.699

3.  Retrotransposon- and microsatellite sequence-associated genomic changes in early generations of a newly synthesized allotetraploid Cucumis × hytivus Chen & Kirkbride.

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4.  Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids.

Authors:  Yanhao Xu; Lan Zhong; Xiaoming Wu; Xiaoping Fang; Jianbo Wang
Journal:  Planta       Date:  2008-11-08       Impact factor: 4.116

5.  Genetic characterization of asymmetric reciprocal hybridization between the flatfishes Paralichthys olivaceus and Paralichthys dentatus.

Authors:  Dongdong Xu; Feng You; Zhihao Wu; Jun Li; Jing Ni; Zhizhong Xiao; Peijun Zhang; Yongli Xu
Journal:  Genetica       Date:  2009-06-02       Impact factor: 1.082

6.  Genomic characterization of interspecific hybrids between the scallops Argopecten purpuratus and A. irradians irradians.

Authors:  Liping Hu; Xiaoting Huang; Junxia Mao; Chunde Wang; Zhenmin Bao
Journal:  PLoS One       Date:  2013-04-19       Impact factor: 3.240

7.  Rapid genetic and epigenetic alterations under intergeneric genomic shock in newly synthesized Chrysanthemum morifolium x Leucanthemum paludosum hybrids (Asteraceae).

Authors:  Haibin Wang; Jiafu Jiang; Sumei Chen; Xiangyu Qi; Weimin Fang; Zhiyong Guan; Nianjun Teng; Yuan Liao; Fadi Chen
Journal:  Genome Biol Evol       Date:  2014-01       Impact factor: 3.416

8.  Rapid genomic and transcriptomic alterations induced by wide hybridization: Chrysanthemum nankingense × Tanacetum vulgare and C. crassum × Crossostephium chinense (Asteraceae).

Authors:  Haibin Wang; Jiafu Jiang; Sumei Chen; Weimin Fang; Zhiyong Guan; Yuan Liao; Fadi Chen
Journal:  BMC Genomics       Date:  2013-12-18       Impact factor: 3.969

9.  Characterization of in vitro haploid and doubled haploid Chrysanthemum morifolium plants via unfertilized ovule culture for phenotypical traits and DNA methylation pattern.

Authors:  Haibin Wang; Bin Dong; Jiafu Jiang; Weimin Fang; Zhiyong Guan; Yuan Liao; Sumei Chen; Fadi Chen
Journal:  Front Plant Sci       Date:  2014-12-22       Impact factor: 5.753

10.  Evolutionary dynamics of microsatellite distribution in plants: insight from the comparison of sequenced brassica, Arabidopsis and other angiosperm species.

Authors:  Jiaqin Shi; Shunmou Huang; Donghui Fu; Jinyin Yu; Xinfa Wang; Wei Hua; Shengyi Liu; Guihua Liu; Hanzhong Wang
Journal:  PLoS One       Date:  2013-03-28       Impact factor: 3.240

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