Literature DB >> 16949326

Unequal genetic redundancies in Arabidopsis--a neglected phenomenon?

Georgette C Briggs1, Karen S Osmont, Chikako Shindo, Richard Sibout, Christian S Hardtke.   

Abstract

Genetic redundancy is a common phenomenon in Arabidopsis and is thought to be responsible for the absence of phenotypes in the majority of single loss-of-function mutants. In this review, we highlight an increasing number of examples in which redundancy between homologous genes is limited or absent despite functional equivalence of the respective proteins. In particular, we focus on cases of unequal redundancy, where the absence of a mutant phenotype in loss-of-function mutants of one gene contrasts with a strong phenotype in mutants of its homolog. In the double mutants, this phenotype is strongly enhanced. Possible explanations for such scenarios are discussed. We propose that the study of unequally redundant gene pairs offers a unique opportunity to understand global patterns of functional genome evolution.

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Year:  2006        PMID: 16949326     DOI: 10.1016/j.tplants.2006.08.005

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  48 in total

1.  The unified ICE-CBF pathway provides a transcriptional feedback control of freezing tolerance during cold acclimation in Arabidopsis.

Authors:  Ye Seul Kim; Minyoung Lee; Jae-Hyung Lee; Hyo-Jun Lee; Chung-Mo Park
Journal:  Plant Mol Biol       Date:  2015-08-27       Impact factor: 4.076

2.  Mutant resources in rice for functional genomics of the grasses.

Authors:  Arjun Krishnan; Emmanuel Guiderdoni; Gynheung An; Yue-ie C Hsing; Chang-deok Han; Myung Chul Lee; Su-May Yu; Narayana Upadhyaya; Srinivasan Ramachandran; Qifa Zhang; Venkatesan Sundaresan; Hirohiko Hirochika; Hei Leung; Andy Pereira
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

3.  The evolution of pyrroline-5-carboxylate synthase in plants: a key enzyme in proline synthesis.

Authors:  Andreia Carina Turchetto-Zolet; Marcia Margis-Pinheiro; Rogerio Margis
Journal:  Mol Genet Genomics       Date:  2008-11-12       Impact factor: 3.291

4.  F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression.

Authors:  Antoine Baudry; Shogo Ito; Young Hun Song; Alexander A Strait; Takatoshi Kiba; Sheen Lu; Rossana Henriques; José L Pruneda-Paz; Nam-Hai Chua; Elaine M Tobin; Steve A Kay; Takato Imaizumi
Journal:  Plant Cell       Date:  2010-03-30       Impact factor: 11.277

5.  Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of Arabidopsis.

Authors:  Christophe Garcion; Antje Lohmann; Elisabeth Lamodière; Jérémy Catinot; Antony Buchala; Peter Doermann; Jean-Pierre Métraux
Journal:  Plant Physiol       Date:  2008-05-01       Impact factor: 8.340

6.  A root-expressed magnesium transporter of the MRS2/MGT gene family in Arabidopsis thaliana allows for growth in low-Mg2+ environments.

Authors:  Michael Gebert; Karoline Meschenmoser; Sona Svidová; Julian Weghuber; Rudolf Schweyen; Karolin Eifler; Henning Lenz; Katrin Weyand; Volker Knoop
Journal:  Plant Cell       Date:  2009-12-04       Impact factor: 11.277

7.  Dual targeting of Arabidopsis holocarboxylase synthetase1: a small upstream open reading frame regulates translation initiation and protein targeting.

Authors:  Juliette Puyaubert; Laurence Denis; Claude Alban
Journal:  Plant Physiol       Date:  2007-12-21       Impact factor: 8.340

8.  Unique and overlapping expression patterns among members of photosynthesis-associated nuclear gene families in Arabidopsis.

Authors:  Megan G Sawchuk; Tyler J Donner; Philip Head; Enrico Scarpella
Journal:  Plant Physiol       Date:  2008-09-26       Impact factor: 8.340

9.  The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants.

Authors:  Pinja Jaspers; Kirk Overmyer; Michael Wrzaczek; Julia P Vainonen; Tiina Blomster; Jarkko Salojärvi; Ramesha A Reddy; Jaakko Kangasjärvi
Journal:  BMC Genomics       Date:  2010-03-12       Impact factor: 3.969

10.  Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis.

Authors:  Kousuke Hanada; Takashi Kuromori; Fumiyoshi Myouga; Tetsuro Toyoda; Wen-Hsiung Li; Kazuo Shinozaki
Journal:  Genome Biol Evol       Date:  2009-10-29       Impact factor: 3.416

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