Literature DB >> 16946475

Crystallization and preliminary X-ray diffraction study of an active-site mutant of pro-Tk-subtilisin from a hyperthermophilic archaeon.

Shun-ichi Tanaka1, Kenji Saito, Hyongi Chon, Hiroyoshi Matsumura, Yuichi Koga, Kazufumi Takano, Shigenori Kanaya.   

Abstract

Crystallization of and preliminary crystallographic studies on an active-site mutant of pro-Tk-subtilisin from the hyperthermophilic archaeon Thermococcus kodakaraensis were performed. The crystal was grown at 277 K by the sitting-drop vapour-diffusion method. Native X-ray diffraction data were collected to 2.3 A resolution using synchrotron radiation from station BL41XU at SPring-8. The crystal belongs to the orthorhombic space group I222, with unit-cell parameters a = 92.69, b = 121.78, c = 77.53 A. Assuming the presence of one molecule per asymmetric unit, the Matthews coefficient V(M) was calculated to be 2.6 A(3) Da(-1) and the solvent content was 53.1%.

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Year:  2006        PMID: 16946475      PMCID: PMC2242867          DOI: 10.1107/S1744309106030454

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  30 in total

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Journal:  Biochemistry       Date:  1976-08-24       Impact factor: 3.162

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Journal:  Nature       Date:  1989-10-05       Impact factor: 49.962

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Authors:  J Eder; M Rheinnecker; A R Fersht
Journal:  J Mol Biol       Date:  1993-09-20       Impact factor: 5.469

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Journal:  J Biol Chem       Date:  1995-10-20       Impact factor: 5.157

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Journal:  Eur J Biochem       Date:  1987-08-03

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Authors:  T Gallagher; P Bryan; G L Gilliland
Journal:  Proteins       Date:  1993-06

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Authors:  U Shinde; M Inouye
Journal:  J Mol Biol       Date:  1995-09-08       Impact factor: 5.469

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Authors:  S M Smith; M M Gottesman
Journal:  J Biol Chem       Date:  1989-12-05       Impact factor: 5.157

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Journal:  J Mol Biol       Date:  1989-11-20       Impact factor: 5.469

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  3 in total

1.  Increase in activation rate of Pro-Tk-subtilisin by a single nonpolar-to-polar amino acid substitution at the hydrophobic core of the propeptide domain.

Authors:  Kota Yuzaki; Yudai Sanda; Dong-Ju You; Ryo Uehara; Yuichi Koga; Shigenori Kanaya
Journal:  Protein Sci       Date:  2013-10-19       Impact factor: 6.725

2.  Identification, overexpression, purification, and biochemical characterization of a novel hyperthermostable keratinase from Geoglobus acetivorans.

Authors:  Duangjai Sittipol; Sudarat Rodpan; Ya'u S Ajingi; Tassanee Lohnoo; Tassanee Lerksuthirat; Yothin Kumsang; Wanta Yingyong; Pongsak Khunrae; Triwit Rattanarojpong; Kovit Pattanapanyasat; Nujarin Jongruja
Journal:  3 Biotech       Date:  2020-11-27       Impact factor: 2.406

3.  Enzymatic activity of a subtilisin homolog, Tk-SP, from Thermococcus kodakarensis in detergents and its ability to degrade the abnormal prion protein.

Authors:  Azumi Hirata; Yuki Hori; Yuichi Koga; Jun Okada; Akikazu Sakudo; Kazuyoshi Ikuta; Shigenori Kanaya; Kazufumi Takano
Journal:  BMC Biotechnol       Date:  2013-02-28       Impact factor: 2.563

  3 in total

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