Literature DB >> 16946463

Structure of the stand-alone RAM-domain protein from Thermus thermophilus HB8.

Noboru Nakano1, Nobuo Okazaki, Shinya Satoh, Koji Takio, Seiki Kuramitsu, Akeo Shinkai, Shigeyuki Yokoyama.   

Abstract

The stand-alone RAM (regulation of amino-acid metabolism) domain protein SraA from Thermus thermophilus HB8 (TTHA0845) was crystallized in the presence of zinc ions. The X-ray crystal structure was determined using a multiple-wavelength anomalous dispersion technique and was refined at 2.4 A resolution to a final R factor of 25.0%. The monomeric structure is a betaalphabetabetaalphabeta fold and it dimerizes mainly through interactions between the antiparallel beta-sheets. Furthermore, five SraA dimers form a ring with external and internal diameters of 70 and 20 A, respectively. This decameric structure is unique compared with the octameric and dodecameric structures found for other stand-alone RAM-domain proteins and the C-terminal RAM domains of Lrp/AsnC-family proteins.

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Year:  2006        PMID: 16946463      PMCID: PMC2242884          DOI: 10.1107/S1744309106031150

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


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