Literature DB >> 16945510

Effects of low-molecular-weight organic ligands and phosphate on DNA adsorption by soil colloids and minerals.

Peng Cai1, Qiaoyun Huang, Jun Zhu, Daihua Jiang, Xueyong Zhou, Xingmin Rong, Wei Liang.   

Abstract

Adsorption of DNA on montmorillonite, kaolinite, goethite and soil clays from an Alfisol in the presence of citrate, tartrate and phosphate was studied. A marked decrease in DNA adsorption was observed on montmorillonite and kaolinite with increasing anion concentrations from 0 to 5 mM. However, the amount of DNA adsorbed by montmorillonite and kaolinite was enhanced when ligand concentration was higher than 5 mM. In the system of soil colloids and goethite, with the increase of anion concentrations, a steady decrease was found and the ability of ligands in depressing DNA adsorption followed the sequence: phosphate > citrate > tartrate. Compared to H2O2-treated clays (inorganic clays), a sharp decrease in DNA adsorption was observed on goethite and organo-mineral complexes (organic clays) with increasing ligand concentrations. The results suggest that the influence of anions on DNA adsorption varies with the type and concentration of anion as well as the surface properties of soil components. Introduction of DNA into the system before the addition of ligands had the greatest amount of DNA adsorption on soil colloids and goethite. Organic and inorganic ligands promoted DNA adsorption on montmorillonite and kaolinite when ligands were introduced into the system before the addition of DNA. The results obtained in this study have important implications for the understanding of the persistence and fate of DNA in soil environments especially rhizosphere soil where various organic and inorganic ligands are active.

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Year:  2006        PMID: 16945510     DOI: 10.1016/j.colsurfb.2006.07.013

Source DB:  PubMed          Journal:  Colloids Surf B Biointerfaces        ISSN: 0927-7765            Impact factor:   5.268


  3 in total

1.  Analysis of oligonucleotide DNA binding and sedimentation properties of montmorillonite clay using ultraviolet light spectroscopy.

Authors:  Gary W Beall; Drew S Sowersby; Rachel D Roberts; Michael H Robson; L Kevin Lewis
Journal:  Biomacromolecules       Date:  2009-01-12       Impact factor: 6.988

Review 2.  The Multiple States of Environmental DNA and What Is Known about Their Persistence in Aquatic Environments.

Authors:  Quentin Mauvisseau; Lynsey R Harper; Michael Sander; Robert H Hanner; Hannah Kleyer; Kristy Deiner
Journal:  Environ Sci Technol       Date:  2022-04-18       Impact factor: 11.357

3.  Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples.

Authors:  Carsten Suhr Jacobsen; Tue Kjærgaard Nielsen; Jan Kjølhede Vester; Peter Stougaard; Jeppe Lund Nielsen; Jana Voriskova; Anne Winding; Petr Baldrian; Binbin Liu; Åsa Frostegård; Dorthe Pedersen; Alexander Tøsdal Tveit; Mette Marianne Svenning; Christoph C Tebbe; Lise Øvreås; Pia Bach Jakobsen; Steven J Blazewicz; Valerie Hubablek; Stefan Bertilsson; Lars Hestbjerg Hansen; S Craig Cary; William E Holben; Flemming Ekelund; Jacob Bælum
Journal:  Sci Rep       Date:  2018-04-09       Impact factor: 4.379

  3 in total

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