Literature DB >> 16944494

The IMGT/HLA and IPD databases.

James Robinson1, Matthew J Waller, Sylvie C Fail, Steven G E Marsh.   

Abstract

The IMGT/HLA database (www.ebi.ac.uk/imgt/hla) has provided a centralized repository for the sequences of the alleles named by the WHO Nomenclature Committee for Factors of the HLA System since 1998. Since its initial release, the database has rapidly grown in size and is recognized as the primary source of information for the study of sequences of the human major histocompatibility complex. The Immuno Polymorphism Database (IPD; www.ebi.ac.uk/ipd) is a set of specialist databases related to the study of polymorphic genes in the immune system. The IPD currently consists of four databases: IPD-KIR contains the allelic sequences of killer-cell immunoglobulin-like receptors; IPD-MHC is a database of sequences of the major histocompatibility complex of different species; IPD-HPA contains alloantigens expressed only on platelets (human platelet antigens or HPA); and IPD-ESTDAB provides access to the European Searchable Tumour Cell-Line Database, a cell bank of immunologically characterized melanoma cell lines.

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Year:  2006        PMID： 16944494     DOI： 10.1002/humu.20406

Source DB:  PubMed          Journal:  Hum Mutat        ISSN： 1059-7794            Impact factor:   4.878


  19 in total

1.  Analytical methods for immunogenetic population data.

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2.  Balancing selection and heterogeneity across the classical human leukocyte antigen loci: a meta-analytic review of 497 population studies.

Authors:  Owen D Solberg; Steven J Mack; Alex K Lancaster; Richard M Single; Yingssu Tsai; Alicia Sanchez-Mazas; Glenys Thomson
Journal:  Hum Immunol       Date:  2008-06-09       Impact factor: 2.850

3.  A community standard for immunogenomic data reporting and analysis: proposal for a STrengthening the REporting of Immunogenomic Studies statement.

Authors:  J A Hollenbach; S J Mack; P-A Gourraud; R M Single; M Maiers; D Middleton; G Thomson; S G E Marsh; M D Varney
Journal:  Tissue Antigens       Date:  2011-11

4.  A small, variable, and irregular killer cell Ig-like receptor locus accompanies the absence of MHC-C and MHC-G in gibbons.

Authors:  Laurent Abi-Rached; Heiner Kuhl; Christian Roos; Boudewijn ten Hallers; Baoli Zhu; Lucia Carbone; Pieter J de Jong; Alan R Mootnick; Florian Knaust; Richard Reinhardt; Peter Parham; Lutz Walter
Journal:  J Immunol       Date:  2009-12-21       Impact factor: 5.422

5.  High-resolution characterization of the structural features and genetic variation of six feline leukocyte antigen class I loci via single molecule, real-time (SMRT) sequencing.

Authors:  Jennifer C Holmes; Elizabeth H Scholl; Allison N Dickey; Paul R Hess
Journal:  Immunogenetics       Date:  2021-06-27       Impact factor: 2.846

6.  Clinical features of ankylosing spondylitis may correlate with HLA-B27 polymorphism.

Authors:  Zhen Wu; Zhiming Lin; Qiujing Wei; Jieruo Gu
Journal:  Rheumatol Int       Date:  2008-10-25       Impact factor: 2.631

7.  Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeficiency virus-infected macaques.

Authors:  Benjamin N Bimber; Benjamin J Burwitz; Shelby O'Connor; Ann Detmer; Emma Gostick; Simon M Lank; David A Price; Austin Hughes; David O'Connor
Journal:  J Virol       Date:  2009-06-10       Impact factor: 5.103

8.  Clear and independent associations of several HLA-DRB1 alleles with differential antibody responses to hepatitis B vaccination in youth.

Authors:  Yufeng Li; Rong Ni; Wei Song; Wenshuo Shao; Sadeep Shrestha; Sushma Ahmad; Coleen K Cunningham; Patricia M Flynn; Bill G Kapogiannis; Craig M Wilson; Jianming Tang
Journal:  Hum Genet       Date:  2009-07-14       Impact factor: 4.132

9.  Molecular typing of major histocompatibility complex class I alleles in the Indian rhesus macaque which restrict SIV CD8+ T cell epitopes.

Authors:  Masahiko Kaizu; Gretta J Borchardt; Chrystal E Glidden; Debra L Fisk; John T Loffredo; David I Watkins; William M Rehrauer
Journal:  Immunogenetics       Date:  2007-07-20       Impact factor: 2.846

10.  In contrast to other stimulatory natural killer cell immunoglobulin-like receptor loci, several KIR2DS5 alleles predominate in African Americans.

Authors:  LiHua Hou; Minghua Chen; Bo Jiang; Kanthi Kariyawasam; Jennifer Ng; Carolyn Katovich Hurley
Journal:  Hum Immunol       Date:  2009-05-03       Impact factor: 2.850
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