Literature DB >> 16939786

Standards in gene expression microarray experiments.

Marc Salit1.   

Abstract

The use of standards in gene expression measurements with DNA microarrays is ubiquitous--they just are not yet the kind of standards that have yielded microarray gene expression profiles that can be readily compared across different studies and different laboratories. They also are not yet enabling microarray measurements of the known, verifiable quality needed so they can be used with confidence in genomic medicine in regulated environments.

Mesh:

Year:  2006        PMID: 16939786     DOI: 10.1016/S0076-6879(06)11005-8

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  5 in total

Review 1.  Standards affecting the consistency of gene expression arrays in clinical applications.

Authors:  Steven A Enkemann
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

2.  Analysis of variance components reveals the contribution of sample processing to transcript variation.

Authors:  Douwe van der Veen; José Miguel Oliveira; Willy A M van den Berg; Leo H de Graaff
Journal:  Appl Environ Microbiol       Date:  2009-02-20       Impact factor: 4.792

Review 3.  Data standards for Omics data: the basis of data sharing and reuse.

Authors:  Stephen A Chervitz; Eric W Deutsch; Dawn Field; Helen Parkinson; John Quackenbush; Phillipe Rocca-Serra; Susanna-Assunta Sansone; Christian J Stoeckert; Chris F Taylor; Ronald Taylor; Catherine A Ball
Journal:  Methods Mol Biol       Date:  2011

4.  Normalization using ploidy and genomic DNA copy number allows absolute quantification of transcripts, proteins and metabolites in cells.

Authors:  Hiroshi Shimada; Takeshi Obayashi; Naoki Takahashi; Minami Matsui; Atsushi Sakamoto
Journal:  Plant Methods       Date:  2010-12-29       Impact factor: 4.993

5.  Microarray Scanner Performance Over a Five-Week Period as Measured With Cy5 and Cy3 Serial Dilution Slides.

Authors:  Mary B Satterfield; Katrice Lippa; Z Q Lu; Marc L Salit
Journal:  J Res Natl Inst Stand Technol       Date:  2008-06-01
  5 in total

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