Literature DB >> 16936054

Rapid in situ evolution of nodulating strains for Biserrula pelecinus L. through lateral transfer of a symbiosis island from the original mesorhizobial inoculant.

Kemanthi G Nandasena1, Graham W O'hara, Ravi P Tiwari, John G Howieson.   

Abstract

Diverse rhizobia able to nodulate Biserrula pelecinus evolved following in situ transfer of nodA and nifH from an inoculant to soil bacteria. Transfer of these chromosomal genes and the presence of an identical integrase gene adjacent to a Phe tRNA gene in both the inoculant and recipients indicate that there was lateral transfer of a symbiosis island.

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Year:  2006        PMID： 16936054      PMCID： PMC1636192          DOI： 10.1128/AEM.00889-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  10 in total

1.  Phylogenetic relationships of three bacterial strains isolated from the pasture legume Biserrula pelecinus L.

Authors:  K G Nandasena; G W O'Hara; R P Tiwari; R J Yates; J G Howieson
Journal:  Int J Syst Evol Microbiol       Date:  2001-11       Impact factor: 2.747

2.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

Authors:  Sudhir Kumar; Koichiro Tamura; Masatoshi Nei
Journal:  Brief Bioinform       Date:  2004-06       Impact factor: 11.622

3.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

4.  Three phylogenetic groups of nodA and nifH genes in Sinorhizobium and Mesorhizobium isolates from leguminous trees growing in Africa and Latin America.

Authors:  K Haukka; K Lindström; J P Young
Journal:  Appl Environ Microbiol       Date:  1998-02       Impact factor: 4.792

5.  Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene.

Authors:  J T Sullivan; C W Ronson
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

8.  Classification of rhizobia based on nodC and nifH gene analysis reveals a close phylogenetic relationship among Phaseolus vulgaris symbionts.

Authors:  Gisèle Laguerre; Sarah M Nour; Valérie Macheret; Juan Sanjuan; Pascal Drouin; Noëlle Amarger
Journal:  Microbiology       Date:  2001-04       Impact factor: 2.777

9.  Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and nifH genes.

Authors:  B D Eardly; J P Young; R K Selander
Journal:  Appl Environ Microbiol       Date:  1992-06       Impact factor: 4.792

10.  The development of plasmid-free strains of Agrobacterium tumefaciens by using incompatibility with a Rhizobium meliloti plasmid to eliminate pAtC58.

Authors:  M F Hynes; R Simon; A Pühler
Journal:  Plasmid       Date:  1985-03       Impact factor: 3.466
  10 in total
  16 in total

1.  Assembly and transfer of tripartite integrative and conjugative genetic elements.

Authors:  Timothy L Haskett; Jason J Terpolilli; Amanuel Bekuma; Graham W O'Hara; John T Sullivan; Penghao Wang; Clive W Ronson; Joshua P Ramsay
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-12       Impact factor: 11.205

2.  Differing courses of genetic evolution of Bradyrhizobium inoculants as revealed by long-term molecular tracing in Acacia mangium plantations.

Authors:  M M Perrineau; C Le Roux; A Galiana; A Faye; R Duponnois; D Goh; Y Prin; G Béna
Journal:  Appl Environ Microbiol       Date:  2014-07-07       Impact factor: 4.792

3.  Deciphering Evolutionary Mechanisms Between Mutualistic and Pathogenic Symbioses.

Authors:  M K Nishiguchi; A M Hirsch; R Devinney; G Vedantam; M A Riley; L M Mansky
Journal:  Vie Milieu       Date:  2008       Impact factor: 0.236

4.  Pangenome Evolution Reconciles Robustness and Instability of Rhizobial Symbiosis.

Authors:  Alexandra J Weisberg; Arafat Rahman; Dakota Backus; Parinita Tyavanagimatt; Jeff H Chang; Joel L Sachs
Journal:  mBio       Date:  2022-04-13       Impact factor: 7.786

5.  Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum.

Authors:  Nitin Kumar; Ganesh Lad; Elisa Giuntini; Maria E Kaye; Piyachat Udomwong; N Jannah Shamsani; J Peter W Young; Xavier Bailly
Journal:  Open Biol       Date:  2015-01       Impact factor: 6.411

6.  Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.).

Authors:  Wayne Reeve; Kemanthi Nandasena; Ron Yates; Ravi Tiwari; Graham O'Hara; Mohamed Ninawi; Olga Chertkov; Lynne Goodwin; David Bruce; Chris Detter; Roxanne Tapia; Shunseng Han; Tanja Woyke; Sam Pitluck; Matt Nolan; Miriam Land; Alex Copeland; Konstantinos Liolios; Amrita Pati; Konstantinos Mavromatis; Victor Markowitz; Nikos Kyrpides; Natalia Ivanova; Lynne Goodwin; Uma Meenakshi; John Howieson
Journal:  Stand Genomic Sci       Date:  2013-12-15

7.  Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)).

Authors:  Wayne Reeve; Kemanthi Nandasena; Ron Yates; Ravi Tiwari; Graham O'Hara; Mohamed Ninawi; Wei Gu; Lynne Goodwin; Chris Detter; Roxanne Tapia; Cliff Han; Alex Copeland; Konstantinos Liolios; Amy Chen; Victor Markowitz; Amrita Pati; Konstantinos Mavromatis; Tanja Woyke; Nikos Kyrpides; Natalia Ivanova; John Howieson
Journal:  Stand Genomic Sci       Date:  2013-12-15

8.  Bipartite Network Analysis of Gene Sharings in the Microbial World.

Authors:  Eduardo Corel; Raphaël Méheust; Andrew K Watson; James O McInerney; Philippe Lopez; Eric Bapteste
Journal:  Mol Biol Evol       Date:  2018-04-01       Impact factor: 16.240

9.  Parallels between experimental and natural evolution of legume symbionts.

Authors:  Camille Clerissi; Marie Touchon; Delphine Capela; Mingxing Tang; Stéphane Cruveiller; Clémence Genthon; Céline Lopez-Roques; Matthew A Parker; Lionel Moulin; Catherine Masson-Boivin; Eduardo P C Rocha
Journal:  Nat Commun       Date:  2018-06-11       Impact factor: 14.919

10.  Spatio-temporal control of mutualism in legumes helps spread symbiotic nitrogen fixation.

Authors:  Benoit Daubech; Philippe Remigi; Ginaini Doin de Moura; Marta Marchetti; Cécile Pouzet; Marie-Christine Auriac; Chaitanya S Gokhale; Catherine Masson-Boivin; Delphine Capela
Journal:  Elife       Date:  2017-10-12       Impact factor: 8.140
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