Literature DB >> 16935348

Study-level wavelet cluster analysis and data-driven signal models in pharmacological MRI.

Adam J Schwarz1, Brandon Whitcher, Alessandro Gozzi, Torsten Reese, Angelo Bifone.   

Abstract

In pharmacological MRI (phMRI) studies tracking signal changes following the acute administration of a compound, the spatiotemporal pattern of response is often unknown a priori. Moreover, when analysed within a general linear model (GLM) framework, the experimental paradigm of a single injection point under-informs the construction of an appropriate signal model, and information from pharmacokinetics or ancillary in vivo studies may be unavailable or insufficient to accurately describe the dynamic signal changes observed following injection of the drug. Here, we extend the application of a data-driven clustering algorithm, wavelet cluster analysis (WCA), to phMRI data from one or more groups of subjects in a study. A WCA decomposition of spatially concatenated time series' provides a compact overview of spatiotemporal response patterns across cohorts, highlighting typical temporal signatures, brain regions implicated in the response and inter-subject variability. Further, we demonstrate the use of regressors based on selected temporal components as suitable signal models in GLM-based analyses, resulting in a close fit to dynamic phMRI signal changes. This approach is illustrated with simulated data and two representative in vivo phMRI studies in the rat (nicotine and apomorphine challenges).

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Year:  2006        PMID: 16935348     DOI: 10.1016/j.jneumeth.2006.07.017

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  9 in total

1.  Brain reinforcement system function is ghrelin dependent: studies in the rat using pharmacological fMRI and intracranial self-stimulation.

Authors:  Paul J Wellman; P Shane Clifford; Juan A Rodriguez; Samuel Hughes; Carla Di Francesco; Sergio Melotto; Michela Tessari; Mauro Corsi; Angelo Bifone; Alessandro Gozzi
Journal:  Addict Biol       Date:  2011-10-21       Impact factor: 4.280

Review 2.  Biomarkers, designs, and interpretations of resting-state fMRI in translational pharmacological research: A review of state-of-the-Art, challenges, and opportunities for studying brain chemistry.

Authors:  Najmeh Khalili-Mahani; Serge A R B Rombouts; Matthias J P van Osch; Eugene P Duff; Felix Carbonell; Lisa D Nickerson; Lino Becerra; Albert Dahan; Alan C Evans; Jean-Paul Soucy; Richard Wise; Alex P Zijdenbos; Joop M van Gerven
Journal:  Hum Brain Mapp       Date:  2017-02-01       Impact factor: 5.038

Review 3.  Data collection and analysis strategies for phMRI.

Authors:  Joseph B Mandeville; Christina H Liu; Wim Vanduffel; John J A Marota; Bruce G Jenkins
Journal:  Neuropharmacology       Date:  2014-03-05       Impact factor: 5.250

4.  Antagonism at serotonin 5-HT(2A) receptors modulates functional activity of frontohippocampal circuit.

Authors:  Alessandro Gozzi; Valerio Crestan; Giuliano Turrini; Marcel Clemens; Angelo Bifone
Journal:  Psychopharmacology (Berl)       Date:  2010-01-29       Impact factor: 4.530

5.  Modulation of fronto-cortical activity by modafinil: a functional imaging and fos study in the rat.

Authors:  Alessandro Gozzi; Valeria Colavito; Paul F Seke Etet; Dino Montanari; Silvia Fiorini; Stefano Tambalo; Angelo Bifone; Gigliola Grassi Zucconi; Marina Bentivoglio
Journal:  Neuropsychopharmacology       Date:  2011-11-02       Impact factor: 7.853

6.  Neuroimaging evidence of altered fronto-cortical and striatal function after prolonged cocaine self-administration in the rat.

Authors:  Alessandro Gozzi; Michela Tessari; Lisa Dacome; Federica Agosta; Stefano Lepore; Anna Lanzoni; Patrizia Cristofori; Emilio M Pich; Mauro Corsi; Angelo Bifone
Journal:  Neuropsychopharmacology       Date:  2011-07-20       Impact factor: 7.853

7.  Functional magnetic resonance imaging reveals different neural substrates for the effects of orexin-1 and orexin-2 receptor antagonists.

Authors:  Alessandro Gozzi; Giuliano Turrini; Laura Piccoli; Mario Massagrande; David Amantini; Marinella Antolini; Prisca Martinelli; Nicola Cesari; Dino Montanari; Michela Tessari; Mauro Corsi; Angelo Bifone
Journal:  PLoS One       Date:  2011-01-28       Impact factor: 3.240

8.  Pharmacological stimulation of NMDA receptors via co-agonist site suppresses fMRI response to phencyclidine in the rat.

Authors:  Alessandro Gozzi; Hugh Herdon; Adam Schwarz; Simone Bertani; Valerio Crestan; Giuliano Turrini; Angelo Bifone
Journal:  Psychopharmacology (Berl)       Date:  2008-08-15       Impact factor: 4.530

9.  Voxel scale complex networks of functional connectivity in the rat brain: neurochemical state dependence of global and local topological properties.

Authors:  Adam J Schwarz; Alessandro Gozzi; Alessandro Chessa; Angelo Bifone
Journal:  Comput Math Methods Med       Date:  2012-07-31       Impact factor: 2.238

  9 in total

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