Literature DB >> 16935304

Multiple assembly states of lumazine synthase: a model relating catalytic function and molecular assembly.

Xiaofeng Zhang1, Petr V Konarev, Maxim V Petoukhov, Dmitri I Svergun, Li Xing, R Holland Cheng, Ilka Haase, Markus Fischer, Adelbert Bacher, Rudolf Ladenstein, Winfried Meining.   

Abstract

Lumazine synthases have been observed in the form of pentamers, dimers of pentamers, icosahedral capsids consisting of 60 subunits and larger capsids with unknown molecular structure. Here we describe the analysis of the assembly of native and mutant forms of lumazine synthases from Bacillus subtilis and Aquifex aeolicus at various pH values and in the presence of different buffers using small angle X-ray scattering and electron microscopy. Both wild-type lumazine synthases are able to form capsids with a diameter of roughly 160 A and larger capsids with diameters of around 300 A. The relative abundance of smaller and larger capsids is strongly dependent on buffer and pH. Both forms can co-exist and are in some cases accompanied by other incomplete or deformed capsids. Several mutants of the B. subtilis lumazine synthase, in which residues in or close to the active site were replaced, as well as an insertion mutant of A. aeolicus lumazine synthase form partially or exclusively larger capsids with a diameter of about 300 A. The mutations also reduce or inhibit enzymatic activity, suggesting that the catalytic function of the enzyme is tightly correlated with its quaternary structure. The data show that multiple assembly forms are a general feature of lumazine synthases.

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Year:  2006        PMID: 16935304     DOI: 10.1016/j.jmb.2006.07.037

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  12 in total

1.  Self-assembling biomolecular catalysts for hydrogen production.

Authors:  Paul C Jordan; Dustin P Patterson; Kendall N Saboda; Ethan J Edwards; Heini M Miettinen; Gautam Basu; Megan C Thielges; Trevor Douglas
Journal:  Nat Chem       Date:  2015-12-21       Impact factor: 24.427

2.  Improvement of the quality of lumazine synthase crystals by protein engineering.

Authors:  Lidia Rodríguez-Fernández; F Javier López-Jaramillo; Adelbert Bacher; Markus Fischer; Sevil Weinkauf
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-06-11

Review 3.  Building Spatial Synthetic Biology with Compartments, Scaffolds, and Communities.

Authors:  Jessica K Polka; Stephanie G Hays; Pamela A Silver
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-08-01       Impact factor: 10.005

4.  The Acetyltransferase RibT From Bacillus subtilis Affects in vivo Dynamics of the Multimeric Heavy Riboflavin Synthase Complex.

Authors:  Daniel Andreas Orlando Rotter; Christoph Heger; Christian Kühm; Nina Schmidt; Antje Schäfer; Thomas Heimerl; Matthias Mack; Peter L Graumann
Journal:  Front Microbiol       Date:  2022-04-14       Impact factor: 5.640

5.  A posteriori determination of the useful data range for small-angle scattering experiments on dilute monodisperse systems.

Authors:  Petr V Konarev; Dmitri I Svergun
Journal:  IUCrJ       Date:  2015-04-21       Impact factor: 4.769

Review 6.  Self-assembling protein nanoparticles in the design of vaccines.

Authors:  Jacinto López-Sagaseta; Enrico Malito; Rino Rappuoli; Matthew J Bottomley
Journal:  Comput Struct Biotechnol J       Date:  2015-11-26       Impact factor: 7.271

7.  Prediction of stability changes upon mutation in an icosahedral capsid.

Authors:  Samuel J Hickman; James F Ross; Emanuele Paci
Journal:  Proteins       Date:  2015-08-01

Review 8.  Second career of a biosynthetic enzyme: Lumazine synthase as a virus-like nanoparticle in vaccine development.

Authors:  Rudolf Ladenstein; Ekaterina Morgunova
Journal:  Biotechnol Rep (Amst)       Date:  2020-07-06

9.  Structure and assembly of scalable porous protein cages.

Authors:  Eita Sasaki; Daniel Böhringer; Michiel van de Waterbeemd; Marc Leibundgut; Reinhard Zschoche; Albert J R Heck; Nenad Ban; Donald Hilvert
Journal:  Nat Commun       Date:  2017-03-10       Impact factor: 14.919

10.  Direct shape determination of intermediates in evolving macromolecular solutions from small-angle scattering data.

Authors:  Petr V Konarev; Dmitri I Svergun
Journal:  IUCrJ       Date:  2018-05-30       Impact factor: 4.769

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