| Literature DB >> 16934433 |
Ivano Bertini1, Eva Grassi, Claudio Luchinat, Alessandro Quattrone, Edoardo Saccenti.
Abstract
Cytochrome c (Cyt c) has key roles in both mitochondrial electron transfer and apoptosis onset and is therefore likely undergoing a strong selective pressure against amino acid variation. Nevertheless, a phylogenetically fast amino acid replacement rate in the Cyt c of species of the anthropoid primate lineage was recently reported. We therefore looked for the presence of nonsynonymous single nucleotide polymorphisms (nsSNPs) in the human Cyt c (HGNC approved gene symbol: CYCS), which, given its cellular constraints, could have important functional consequences, and found a large number of putative nsSNPs reported in the dbSNP database. We then subjected these putative SNPs to experimental validation by sequencing the Cyt c gene in a panel of 95 individuals assumed as a standard reference of the human population diversity. Surprisingly, none of the putative SNPs survived experimental validation. We conclude that non-rare allelic variants of the Cyt c protein are absent in the human populations analyzed in this study.Entities:
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Year: 2006 PMID: 16934433 DOI: 10.1016/j.ygeno.2006.07.010
Source DB: PubMed Journal: Genomics ISSN: 0888-7543 Impact factor: 5.736