Literature DB >> 16931035

Isotope pattern evaluation for the reduction of elemental compositions assigned to high-resolution mass spectral data from electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry.

Norbert Stoll1, Enrico Schmidt, Kerstin Thurow.   

Abstract

The number of possible chemical formulae assigned to an accurate determined mass was significantly reduced by comparing spectral and theoretical isotope patterns based on mass measurement obtained with an ultrahigh-resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometer (ESI-FTICR-MS) at high field intensity (7 T). Reduction is performed by rating congruency between experimental and theoretical pattern intensity and mass, and filtering out compositions with insufficient user-definable results. The methods used for isotope pattern simulation, peak searching, and comparison will be briefly described and evaluated on molecule ion signals of 25 compounds (300-1000 Da) applying a mass accuracy of +/-5 ppm, a set of eight elements with constant constraints (C0-200H0-1000N0-15O0-15S0-2Cl0-2Br0-2Ru0-1), natural isotope abundances and experimental resolution (full width at half maximum).

Entities:  

Year:  2006        PMID: 16931035     DOI: 10.1016/j.jasms.2006.07.022

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  10 in total

1.  Exact masses and chemical formulas of individual Suwannee River fulvic acids from ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectra.

Authors:  Alexandra C Stenson; Alan G Marshall; William T Cooper
Journal:  Anal Chem       Date:  2003-03-15       Impact factor: 6.986

Review 2.  Fourier transform ion cyclotron resonance mass spectrometry: a primer.

Authors:  A G Marshall; C L Hendrickson; G S Jackson
Journal:  Mass Spectrom Rev       Date:  1998 Jan-Feb       Impact factor: 10.946

3.  Cyclotron motion of two Coulombically interacting ion clouds with implications to Fourier-transform ion cyclotron resonance mass spectrometry.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1995-10

4.  Resolution and chemical formula identification of aromatic hydrocarbons and aromatic compounds containing sulfur, nitrogen, or oxygen in petroleum distillates and refinery streams.

Authors:  S Guan; A G Marshall; S E Scheppele
Journal:  Anal Chem       Date:  1996-01-01       Impact factor: 6.986

5.  MASSFORM: a computer program for the assignment of elemental compositions to high resolution mass spectral data.

Authors:  A L Robertson; M C Hamming
Journal:  Biomed Mass Spectrom       Date:  1977-08

6.  Stable isotope incorporation triples the upper mass limit for determination of elemental composition by accurate mass measurement.

Authors:  R P Rodgers; E N Blumer; C L Hendrickson; A G Marshall
Journal:  J Am Soc Mass Spectrom       Date:  2000-10       Impact factor: 3.109

7.  Determination of oligonucleotide composition from mass spectrometrically measured molecular weight.

Authors:  S C Pomerantz; J A Kowalak; J A McCloskey
Journal:  J Am Soc Mass Spectrom       Date:  1993-03       Impact factor: 3.109

8.  Collision-induced dissociation pathways of anabolic steroids by electrospray ionization tandem mass spectrometry.

Authors:  Fuyu Guan; Lawrence R Soma; Yi Luo; Cornelius E Uboh; Scott Peterman
Journal:  J Am Soc Mass Spectrom       Date:  2006-02-17       Impact factor: 3.109

9.  Counting individual sulfur atoms in a protein by ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry: experimental resolution of isotopic fine structure in proteins.

Authors:  S D Shi; C L Hendrickson; A G Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

10.  Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm.

Authors:  Tobias Kind; Oliver Fiehn
Journal:  BMC Bioinformatics       Date:  2006-04-28       Impact factor: 3.169

  10 in total
  6 in total

1.  Spectral accuracy and sulfur counting capabilities of the LTQ-FT-ICR and the LTQ-Orbitrap XL for small molecule analysis.

Authors:  Samantha L Blake; S Hunter Walker; David C Muddiman; David Hinks; Keith R Beck
Journal:  J Am Soc Mass Spectrom       Date:  2011-09-21       Impact factor: 3.109

2.  Spectral accuracy of molecular ions in an LTQ/Orbitrap mass spectrometer and implications for elemental composition determination.

Authors:  John C L Erve; Ming Gu; Yongdong Wang; William DeMaio; Rasmy E Talaat
Journal:  J Am Soc Mass Spectrom       Date:  2009-07-30       Impact factor: 3.109

3.  Elemental Composition Determinations Using the Abundant Isotope.

Authors:  Robert B Cody; Thierry Fouquet
Journal:  J Am Soc Mass Spectrom       Date:  2019-05-06       Impact factor: 3.109

4.  Prediction, Detection, and Validation of Isotope Clusters in Mass Spectrometry Data.

Authors:  Hendrik Treutler; Steffen Neumann
Journal:  Metabolites       Date:  2016-10-20

5.  Metabolite signal identification in accurate mass metabolomics data with MZedDB, an interactive m/z annotation tool utilising predicted ionisation behaviour 'rules'.

Authors:  John Draper; David P Enot; David Parker; Manfred Beckmann; Stuart Snowdon; Wanchang Lin; Hassan Zubair
Journal:  BMC Bioinformatics       Date:  2009-07-21       Impact factor: 3.169

6.  Computational mass spectrometry for small molecules.

Authors:  Kerstin Scheubert; Franziska Hufsky; Sebastian Böcker
Journal:  J Cheminform       Date:  2013-03-01       Impact factor: 5.514

  6 in total

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