Literature DB >> 16928428

The human HYMAI/PLAGL1 differentially methylated region acts as an imprint control region in mice.

Takahiro Arima1, Katsuhisa Yamasaki, Rosalind M John, Kiyoko Kato, Kunihiko Sakumi, Yusaku Nakabeppu, Norio Wake, Tomohiro Kono.   

Abstract

Imprinting centers (IC) can be defined as cis-elements that are recognized in the germ line and are epigenetically modified to bring about the full imprinting program in a somatic cell. Two paternally expressed human genes, HYMAI and PLAGL1 (LOT1/ZAC), are located within human chromosome 6q24. Within this region lies a 1-kb CpG island that is differentially methylated in somatic cells, unmethylated in sperm, and methylated in mature oocytes in mice, characteristic features of an IC. Loss of methylation of the homologous region in humans is observed in patients with transient neonatal diabetes mellitus and hypermethylation is associated with a variety of cancers, suggesting that this region regulates the expression of one or more key genes in this region involved in these diseases. We now report that a transgene carrying the human HYMAI/PLAGL1 DMR was methylated in the correct parent-origin-specific manner in mice and this was sufficient to confer imprinted expression from the transgene. Therefore, we propose that this DMR functions as the IC for the HYMAI/PLAGL1 domain.

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Year:  2006        PMID: 16928428     DOI: 10.1016/j.ygeno.2006.07.005

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  10 in total

1.  Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions.

Authors:  Scott V Dindot; Richard Person; Mark Strivens; Rejinaldo Garcia; Arthur L Beaudet
Journal:  Genome Res       Date:  2009-06-19       Impact factor: 9.043

2.  Modulation of PLAGL2 transactivation by positive cofactor 2 (PC2), a component of the ARC/Mediator complex.

Authors:  Sara J Wezensky; Tracey S Hanks; Michelle J Wilkison; Mary Cloud Ammons; Daniel W Siemsen; Katherine A Gauss
Journal:  Gene       Date:  2009-12-16       Impact factor: 3.688

3.  The effects of culture on genomic imprinting profiles in human embryonic and fetal mesenchymal stem cells.

Authors:  Jennifer Frost; Dave Monk; Dafni Moschidou; Pascale V Guillot; Philip Stanier; Stephen L Minger; Nicholas M Fisk; Harry D Moore; Gudrun E Moore
Journal:  Epigenetics       Date:  2011-01-01       Impact factor: 4.528

4.  Discovering candidate imprinted genes and imprinting control regions in the human genome.

Authors:  Minou Bina
Journal:  BMC Genomics       Date:  2020-05-31       Impact factor: 3.969

Review 5.  CRISPR/Cas9 Epigenome Editing Potential for Rare Imprinting Diseases: A Review.

Authors:  Linn Amanda Syding; Petr Nickl; Petr Kasparek; Radislav Sedlacek
Journal:  Cells       Date:  2020-04-16       Impact factor: 6.600

6.  Along the Bos taurus genome, uncover candidate imprinting control regions.

Authors:  Phillip Wyss; Carol Song; Minou Bina
Journal:  BMC Genomics       Date:  2022-06-28       Impact factor: 4.547

7.  Detection of differentially expressed genes between Erhualian and Large White placentas on day 75 and 90 of gestation.

Authors:  Quan-Yong Zhou; Ming-Di Fang; Ting-Hua Huang; Chang-Chun Li; Mei Yu; Shu-Hong Zhao
Journal:  BMC Genomics       Date:  2009-07-26       Impact factor: 3.969

8.  Transgenic epigenetics: using transgenic organisms to examine epigenetic phenomena.

Authors:  Lori A McEachern
Journal:  Genet Res Int       Date:  2012-03-27

9.  Patterns of hybrid loss of imprinting reveal tissue- and cluster-specific regulation.

Authors:  Christopher D Wiley; Harry H Matundan; Amanda R Duselis; Alison T Isaacs; Paul B Vrana
Journal:  PLoS One       Date:  2008-10-29       Impact factor: 3.240

10.  DNMT1 and AIM1 Imprinting in human placenta revealed through a genome-wide screen for allele-specific DNA methylation.

Authors:  Radhika Das; Yew Kok Lee; Ruslan Strogantsev; Shengnan Jin; Yen Ching Lim; Poh Yong Ng; Xueqin Michelle Lin; Keefe Chng; George Sh Yeo; Anne C Ferguson-Smith; Chunming Ding
Journal:  BMC Genomics       Date:  2013-10-05       Impact factor: 3.969

  10 in total

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