Literature DB >> 16927254

Site-specific labelling of proteins with a rigid lanthanide-binding tag.

Xun-Cheng Su1, Thomas Huber, Nicholas E Dixon, Gottfried Otting.   

Abstract

This paper describes a generic method for the site-specific attachment of lanthanide complexes to proteins through a disulfide bond. The method is demonstrated by the attachment of a lanthanide-binding peptide tag to the single cysteine residue present in the N-terminal DNA-binding domain of the Escherichia coli arginine repressor. Complexes with Y(3+), Tb(3+), Dy(3+), Ho(3+), Er(3+), Tm(3+) and Yb(3+) ions were formed and analysed by NMR spectroscopy. Large pseudocontact shifts and residual dipolar couplings were induced by the lanthanide-binding tag in the protein NMR spectrum, a result indicating that the tag was rigidly attached to the protein. The axial components of the magnetic susceptibility anisotropy tensors determined for the different lanthanide ions were similarly but not identically oriented. A single tag with a single protein attachment site can provide different pseudocontact shifts from different magnetic susceptibility tensors and thus provide valuable nondegenerate long-range structure information in the determination of 3D protein structures by NMR spectroscopy.

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Year:  2006        PMID: 16927254     DOI: 10.1002/cbic.200600142

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  26 in total

Review 1.  Structural NMR of protein oligomers using hybrid methods.

Authors:  Xu Wang; Hsiau-Wei Lee; Yizhou Liu; James H Prestegard
Journal:  J Struct Biol       Date:  2010-11-11       Impact factor: 2.867

2.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

Authors:  Katja Barthelmes; Anne M Reynolds; Ezra Peisach; Hendrik R A Jonker; Nicholas J DeNunzio; Karen N Allen; Barbara Imperiali; Harald Schwalbe
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

3.  The Par-3 NTD adopts a PB1-like structure required for Par-3 oligomerization and membrane localization.

Authors:  Wei Feng; Hao Wu; Ling-Nga Chan; Mingjie Zhang
Journal:  EMBO J       Date:  2007-05-03       Impact factor: 11.598

4.  Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect.

Authors:  Tomohide Saio; Kenji Ogura; Masashi Yokochi; Yoshihiro Kobashigawa; Fuyuhiko Inagaki
Journal:  J Biomol NMR       Date:  2009-05-26       Impact factor: 2.835

5.  Information content of long-range NMR data for the characterization of conformational heterogeneity.

Authors:  Witold Andrałojć; Konstantin Berlin; David Fushman; Claudio Luchinat; Giacomo Parigi; Enrico Ravera; Luca Sgheri
Journal:  J Biomol NMR       Date:  2015-06-05       Impact factor: 2.835

6.  FANTEN: a new web-based interface for the analysis of magnetic anisotropy-induced NMR data.

Authors:  Mauro Rinaldelli; Azzurra Carlon; Enrico Ravera; Giacomo Parigi; Claudio Luchinat
Journal:  J Biomol NMR       Date:  2014-11-22       Impact factor: 2.835

7.  How reliable are pseudocontact shifts induced in proteins and ligands by mobile paramagnetic metal tags? A modelling study.

Authors:  Dmitry Shishmarev; Gottfried Otting
Journal:  J Biomol NMR       Date:  2013-05-08       Impact factor: 2.835

8.  Paramagnetic Tag for Glycosylation Sites in Glycoproteins: Structural Constraints on Heparan Sulfate Binding to Robo1.

Authors:  Maria J Moure; Alexander Eletsky; Qi Gao; Laura C Morris; Jeong-Yeh Yang; Digantkumar Chapla; Yuejie Zhao; Chengli Zong; I Jonathan Amster; Kelley W Moremen; Geert-Jan Boons; James H Prestegard
Journal:  ACS Chem Biol       Date:  2018-08-16       Impact factor: 5.100

9.  An NMR strategy for fragment-based ligand screening utilizing a paramagnetic lanthanide probe.

Authors:  Tomohide Saio; Kenji Ogura; Kazumi Shimizu; Masashi Yokochi; Terrence R Burke; Fuyuhiko Inagaki
Journal:  J Biomol NMR       Date:  2011-09-17       Impact factor: 2.835

10.  Prospects for lanthanides in structural biology by NMR.

Authors:  Gottfried Otting
Journal:  J Biomol NMR       Date:  2008-08-08       Impact factor: 2.835

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