Literature DB >> 16926507

Identification of catalytic amino acids of cyclodextran glucanotransferase from Bacillus circulans T-3040.

Tomoko Yamamoto1, Kazue Terasawa, Young-Min Kim, Atsuo Kimura, Yoshiaki Kitamura, Mikihiko Kobayashi, Kazumi Funane.   

Abstract

In glycoside hydrolase family 66 (see http://afmb.cnrs-mrs.fr/CAZY/), cyclodextran glucanotransferase (CITase) is the only transglycosylation enzyme, all the other family 66 enzymes being dextranases. To analyze the catalytic amino acids of CITase, we modified CITase chemically from the T-3040 strain of Bacillus circulans with 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide (EDC). EDC inactivated the enzyme by following pseudo-first order kinetics. In addition, the substrates of an isomaltooligosaccharide and a cyclodextran inhibited EDC-induced enzyme inactivation, implicating the carboxyl groups of CITase as the catalytic amino acids of the enzyme. When two conserved aspartic acid residues, Asp145 and Asp270, were replaced with Asn in T-3040 mature CITase, CIT-D270N was completely inactive, and CIT-D145N had reduced activity. The V(max) of CIT-D145N was 1% of that of wild-type CITase, whereas the K(m) of CIT-D145N was about the same as that of the wild-type enzyme. These findings indicate that Asp145 and Asp270 play an important role in the enzymatic reaction of T-3040 CITase.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16926507     DOI: 10.1271/bbb.60105

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  6 in total

1.  Crystallization and preliminary X-ray crystallographic analysis of cycloisomaltooligosaccharide glucanotransferase from Bacillus circulans T-3040.

Authors:  Nobuhiro Suzuki; Young Min Kim; Mitsuru Momma; Zui Fujimoto; Mikihiko Kobayashi; Atsuo Kimura; Kazumi Funane
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

2.  Structural elucidation of the cyclization mechanism of α-1,6-glucan by Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase.

Authors:  Nobuhiro Suzuki; Zui Fujimoto; Young-Min Kim; Mitsuru Momma; Naomi Kishine; Ryuichiro Suzuki; Shiho Suzuki; Shinichi Kitamura; Mikihiko Kobayashi; Atsuo Kimura; Kazumi Funane
Journal:  J Biol Chem       Date:  2014-03-10       Impact factor: 5.157

3.  Crystallization and preliminary crystallographic analysis of dextranase from Streptococcus mutans.

Authors:  Nobuhiro Suzuki; Young Min Kim; Zui Fujimoto; Mitsuru Momma; Hee Kwon Kang; Kazumi Funane; Masayuki Okuyama; Haruhide Mori; Atsuo Kimura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

4.  Novel dextranase catalyzing cycloisomaltooligosaccharide formation and identification of catalytic amino acids and their functions using chemical rescue approach.

Authors:  Young-Min Kim; Yoshiaki Kiso; Tomoe Muraki; Min-Sun Kang; Hiroyuki Nakai; Wataru Saburi; Weeranuch Lang; Hee-Kwon Kang; Masayuki Okuyama; Haruhide Mori; Ryuichiro Suzuki; Kazumi Funane; Nobuhiro Suzuki; Mitsuru Momma; Zui Fujimoto; Tetsuya Oguma; Mikihiko Kobayashi; Doman Kim; Atsuo Kimura
Journal:  J Biol Chem       Date:  2012-03-29       Impact factor: 5.157

5.  Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66.

Authors:  Nobuhiro Suzuki; Young-Min Kim; Zui Fujimoto; Mitsuru Momma; Masayuki Okuyama; Haruhide Mori; Kazumi Funane; Atsuo Kimura
Journal:  J Biol Chem       Date:  2012-02-15       Impact factor: 5.157

6.  Characterization of an Alkaline GH49 Dextranase from Marine Bacterium Arthrobacter oxydans KQ11 and Its Application in the Preparation of Isomalto-Oligosaccharide.

Authors:  Hongfei Liu; Wei Ren; Mingsheng Ly; Haifeng Li; Shujun Wang
Journal:  Mar Drugs       Date:  2019-08-19       Impact factor: 5.118

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.