Literature DB >> 1692647

Pseudoknots: a new motif in the RNA game.

C W Pleij1.   

Abstract

In the last few years a novel RNA folding principle called pseudoknotting has emerged. Originally discovered in noncoding regions of plant viral RNAs, pseudoknots now appear to be a widespread structural motif in a number of functionally different RNAs. These structural elements are part of tRNA-like structures and are involved in folding catalytic sites of ribozymes. They increase the efficiency of ribosomal frameshifting or can serve as specific binding sites for regulatory proteins.

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Year:  1990        PMID: 1692647     DOI: 10.1016/0968-0004(90)90214-v

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  57 in total

1.  PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type.

Authors:  Kyungsook Han; Yanga Byun
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  Second-site suppressor mutations assist in studying the function of the 3' noncoding region of turnip yellow mosaic virus RNA.

Authors:  C H Tsai; T W Dreher
Journal:  J Virol       Date:  1992-09       Impact factor: 5.103

3.  The gene coding for small ribosomal subunit RNA in the basidiomycete Ustilago maydis contains a group I intron.

Authors:  R De Wachter; J M Neefs; A Goris; Y Van de Peer
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

4.  Bipartite signal for read-through suppression in murine leukemia virus mRNA: an eight-nucleotide purine-rich sequence immediately downstream of the gag termination codon followed by an RNA pseudoknot.

Authors:  Y X Feng; H Yuan; A Rein; J G Levin
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

5.  A heuristic approach for detecting RNA H-type pseudoknots.

Authors:  Chun-Hsiang Huang; Chin Lung Lu; Hsien-Tai Chiu
Journal:  Bioinformatics       Date:  2005-06-30       Impact factor: 6.937

6.  Segmental message stabilization as a mechanism for differential expression from the Zymomonas mobilis gap operon.

Authors:  C K Eddy; K F Keshav; H An; E A Utt; J P Mejia; L O Ingram
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

7.  A computer method for finding common base paired helices in aligned sequences: application to the analysis of random sequences.

Authors:  L Chan; M Zuker; A B Jacobson
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

8.  Evidence that genomic and antigenomic RNA self-cleaving elements from hepatitis delta virus have similar secondary structures.

Authors:  S P Rosenstein; M D Been
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

Review 9.  Transgenic regulation in laboratory animals.

Authors:  S Rusconi
Journal:  Experientia       Date:  1991-09-15

10.  The 3' untranslated region of satellite tobacco necrosis virus RNA stimulates translation in vitro.

Authors:  X Danthinne; J Seurinck; F Meulewaeter; M Van Montagu; M Cornelissen
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

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