Literature DB >> 16925423

Solid-state 2H NMR structure of retinal in metarhodopsin I.

Gilmar F J Salgado1, Andrey V Struts, Katsunori Tanaka, Sonja Krane, Koji Nakanishi, Michael F Brown.   

Abstract

The structural and photochemical changes in rhodopsin due to absorption of light are crucial for understanding the process of visual signaling. We investigated the structure of trans-retinal in the metarhodopsin I photointermediate (MI), where the retinylidene cofactor functions as an antagonist. Rhodopsin was regenerated using retinal that was (2)H-labeled at the C5, C9, or C13 methyl groups and was reconstituted with 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine. Membranes were aligned by isopotential centrifugation, and rhodopsin in the supported bilayers was then bleached and cryotrapped in the MI state. Solid-state (2)H NMR spectra of oriented rhodopsin in the low-temperature lipid gel state were analyzed in terms of a static uniaxial distribution (Nevzorov, A. A.; Moltke, S.; Heyn, M. P.; Brown, M. F. J. Am. Chem. Soc. 1999, 121, 7636-7643). The line shape analysis allowed us to obtain the methyl bond orientations relative to the membrane normal in the presence of substantial alignment disorder (mosaic spread). Relative orientations of the methyl groups were used to calculate effective torsional angles between the three different planes that represent the polyene chain and the beta-ionone ring of retinal. Assuming a three-plane model, a less distorted structure was found for retinal in MI compared to the dark state. Our results are pertinent to how photonic energy is channeled within the protein to allow the strained retinal conformation to relax, thereby forming the activated state of the receptor.

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Year:  2006        PMID: 16925423     DOI: 10.1021/ja058738+

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

1.  Molecular dynamics simulations reveal specific interactions of post-translational palmitoyl modifications with rhodopsin in membranes.

Authors:  Bjoern E S Olausson; Alan Grossfield; Michael C Pitman; Michael F Brown; Scott E Feller; Alexander Vogel
Journal:  J Am Chem Soc       Date:  2012-02-22       Impact factor: 15.419

Review 2.  Solid-state 2H NMR spectroscopy of retinal proteins in aligned membranes.

Authors:  Michael F Brown; Maarten P Heyn; Constantin Job; Suhkmann Kim; Stephan Moltke; Koji Nakanishi; Alexander A Nevzorov; Andrey V Struts; Gilmar F J Salgado; Ingrid Wallat
Journal:  Biochim Biophys Acta       Date:  2007-10-23

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  Mechanism of signal propagation upon retinal isomerization: insights from molecular dynamics simulations of rhodopsin restrained by normal modes.

Authors:  Basak Isin; Klaus Schulten; Emad Tajkhorshid; Ivet Bahar
Journal:  Biophys J       Date:  2008-04-04       Impact factor: 4.033

5.  Crystal structure of metarhodopsin II.

Authors:  Hui-Woog Choe; Yong Ju Kim; Jung Hee Park; Takefumi Morizumi; Emil F Pai; Norbert Krauss; Klaus Peter Hofmann; Patrick Scheerer; Oliver P Ernst
Journal:  Nature       Date:  2011-03-09       Impact factor: 49.962

6.  Curvature and hydrophobic forces drive oligomerization and modulate activity of rhodopsin in membranes.

Authors:  Ana Vitória Botelho; Thomas Huber; Thomas P Sakmar; Michael F Brown
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

7.  Dynamic structure of retinylidene ligand of rhodopsin probed by molecular simulations.

Authors:  Pick-Wei Lau; Alan Grossfield; Scott E Feller; Michael C Pitman; Michael F Brown
Journal:  J Mol Biol       Date:  2007-06-26       Impact factor: 5.469

8.  Two protonation switches control rhodopsin activation in membranes.

Authors:  Mohana Mahalingam; Karina Martínez-Mayorga; Michael F Brown; Reiner Vogel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-07       Impact factor: 11.205

9.  Protein Sequence and Membrane Lipid Roles in the Activation Kinetics of Bovine and Human Rhodopsins.

Authors:  Istvan Szundi; Chie Funatogawa; Ying Guo; Elsa C Y Yan; David S Kliger
Journal:  Biophys J       Date:  2017-11-07       Impact factor: 4.033

Review 10.  Retinal dynamics during light activation of rhodopsin revealed by solid-state NMR spectroscopy.

Authors:  Michael F Brown; Gilmar F J Salgado; Andrey V Struts
Journal:  Biochim Biophys Acta       Date:  2009-08-28
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