Literature DB >> 16920829

A model for enhanced nucleation of protein crystals on a fractal porous substrate.

S Stolyarova1, E Saridakis, N E Chayen, Y Nemirovsky.   

Abstract

The phenomenon of enhanced nucleation and crystallization of proteins on porous silicon (PS) is theoretically studied and explained. The PS layer is treated as a fractal structure, and a new mechanism of local supersaturation associated with the fractality is proposed. It is shown that the number of adsorbed molecules on a fragment with a fractal surface significantly exceeds that on one with flat surfaces. For a fractal PS surface, a local concentration of molecules that is sufficient for nucleation is possible inside and in the close vicinity of the pores, even when the average conditions in the bulk of the solution correspond to metastability. The wide distribution of fractal pore size is favorable for the crystallization of a wide range of macromolecules using the same sample. In addition, the PS technology is very flexible, allowing tailoring the pore size and concentration as well as the fractal properties to specific proteins by changing the fabrication conditions.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16920829      PMCID: PMC1630463          DOI: 10.1529/biophysj.106.082545

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  8 in total

1.  Porous silicon: an effective nucleation-inducing material for protein crystallization.

Authors:  N E Chayen; E Saridakis; R El-Bahar; Y Nemirovsky
Journal:  J Mol Biol       Date:  2001-09-28       Impact factor: 5.469

Review 2.  Turning protein crystallisation from an art into a science.

Authors:  Naomi E Chayen
Journal:  Curr Opin Struct Biol       Date:  2004-10       Impact factor: 6.809

3.  Porod scattering from fractal surfaces.

Authors: 
Journal:  Phys Rev Lett       Date:  1988-03-28       Impact factor: 9.161

4.  Multilayer adsorption on a fractally rough surface.

Authors: 
Journal:  Phys Rev Lett       Date:  1989-04-24       Impact factor: 9.161

5.  Protein crystals and charged surfaces: interactions and heterogeneous nucleation.

Authors:  R P Sear
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-06-20

6.  Heterogeneous and epitaxial nucleation of protein crystals on mineral surfaces.

Authors:  A McPherson; P Shlichta
Journal:  Science       Date:  1988-01-22       Impact factor: 47.728

7.  Protein crystallisation on chemically modified mica surfaces.

Authors:  Giuseppe Falini; Simona Fermani; Giovanna Conforti; Alberto Ripamonti
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-26

8.  The effect of surface charge on hydroxyapatite nucleation.

Authors:  Peixin Zhu; Yoshitake Masuda; Kunihito Koumoto
Journal:  Biomaterials       Date:  2004-08       Impact factor: 12.479

  8 in total
  6 in total

1.  Selection of Protein Crystal Forms Facilitated by Polymer-Induced Heteronucleation.

Authors:  Adam L Grzesiak; Adam J Matzger
Journal:  Cryst Growth Des       Date:  2008       Impact factor: 4.076

2.  Heterogeneous nucleation of protein crystals on fluorinated layered silicate.

Authors:  Keita Ino; Itsumi Udagawa; Kazuki Iwabata; Yoichi Takakusagi; Munehiro Kubota; Keiichi Kurosaka; Kazuhito Arai; Yasutaka Seki; Masaya Nogawa; Tatsuo Tsunoda; Fujio Mizukami; Hayao Taguchi; Kengo Sakaguchi
Journal:  PLoS One       Date:  2011-07-27       Impact factor: 3.240

3.  Protein crystal nucleation in pores.

Authors:  Christo N Nanev; Emmanuel Saridakis; Naomi E Chayen
Journal:  Sci Rep       Date:  2017-01-16       Impact factor: 4.379

4.  NiCo2O4/RGO Hybrid Nanostructures on Surface-Modified Ni Core for Flexible Wire-Shaped Supercapacitor.

Authors:  Prashant Shivaji Shewale; Kwang-Seok Yun
Journal:  Nanomaterials (Basel)       Date:  2021-03-26       Impact factor: 5.076

Review 5.  An overview of biological macromolecule crystallization.

Authors:  Irene Russo Krauss; Antonello Merlino; Alessandro Vergara; Filomena Sica
Journal:  Int J Mol Sci       Date:  2013-05-31       Impact factor: 5.923

6.  Exploring Carbon Nanomaterial Diversity for Nucleation of Protein Crystals.

Authors:  Lata Govada; Hannah S Leese; Emmanuel Saridakis; Sean Kassen; Benny Chain; Sahir Khurshid; Robert Menzel; Sheng Hu; Milo S P Shaffer; Naomi E Chayen
Journal:  Sci Rep       Date:  2016-02-04       Impact factor: 4.379

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.