Literature DB >> 16919348

Engineering a de novo internal disulfide bridge to improve the thermal stability of xylanase from Bacillus stearothermophilus No. 236.

Mi-Young Jeong1, Sanguk Kim, Cheol-Won Yun, Yong-Jin Choi, Ssang-Goo Cho.   

Abstract

Improvement of thermal stability of the Bacillus stearthermophilus No. 236 endo-beta-1,4-xylanase (XynA) was tried by engineering a de novo designed disulfide bridge. Disulfide design was performed firstly using the disulfide bond design program (Disulfide by Designtrade mark) to identify residue pairs having the favorable geometric characteristics for disulfide formation. Subsequently, the selected 25 amino acid pairs were filtered with the evolutionarily conserved Cys residues identified by alignment of 34 family 11 mesophilic and thermophilic xylanases, and also by doing inspection of the molecular model of the xylanases. Only one pair (Ser100 and Asn150) was finally chosen, and the respective amino acids were substituted with cysteine residues. The newly designed disulfide bridge increased thermostability of the XynA about 5 degrees C. This improved thermal stability was supported by the increase in the energy barrier for inactivation. As expected, the mutant XynA SNC demonstrated its better use in the hydrolysis of xylan at substantially higher temperatures than permitted by its native counterpart. The mutation had little influence on the catalytic efficiency and other functional properties of the XynA. In conclusion, it is evident that the strategically placed disulfide bridge has made the XynA be more effective in resisting thermal inactivation.

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Year:  2006        PMID: 16919348     DOI: 10.1016/j.jbiotec.2006.07.005

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  14 in total

1.  In silico rational design and systems engineering of disulfide bridges in the catalytic domain of an alkaline α-amylase from Alkalimonas amylolytica to improve thermostability.

Authors:  Long Liu; Zhuangmei Deng; Haiquan Yang; Jianghua Li; Hyun-dong Shin; Rachel R Chen; Guocheng Du; Jian Chen
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

2.  Enhancing protein stability with extended disulfide bonds.

Authors:  Tao Liu; Yan Wang; Xiaozhou Luo; Jack Li; Sean A Reed; Han Xiao; Travis S Young; Peter G Schultz
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3.  A designed redox-controlled caspase.

Authors:  Witold A Witkowski; Jeanne A Hardy
Journal:  Protein Sci       Date:  2011-08       Impact factor: 6.725

4.  Improvement in Thermostability of an Achaetomium sp. Strain Xz8 Endopolygalacturonase via the Optimization of Charge-Charge Interactions.

Authors:  Tao Tu; Huiying Luo; Kun Meng; Yanli Cheng; Rui Ma; Pengjun Shi; Huoqing Huang; Yingguo Bai; Yaru Wang; Lujia Zhang; Bin Yao
Journal:  Appl Environ Microbiol       Date:  2015-07-24       Impact factor: 4.792

5.  Structure-based design of a hyperthermostable AgUricase for hyperuricemia and gout therapy.

Authors:  Yi Shi; Ting Wang; X Edward Zhou; Qiu-Feng Liu; Yi Jiang; H Eric Xu
Journal:  Acta Pharmacol Sin       Date:  2019-06-28       Impact factor: 6.150

6.  Importance of a single disulfide bond for the PsbO protein of photosystem II: protein structure stability and soluble overexpression in Escherichia coli.

Authors:  Julia Nikitina; Tatiana Shutova; Bogdan Melnik; Sergey Chernyshov; Victor Marchenkov; Gennady Semisotnov; Vyacheslav Klimov; Göran Samuelsson
Journal:  Photosynth Res       Date:  2008-08-16       Impact factor: 3.573

7.  Engineering and introduction of de novo disulphide bridges in organophosphorus hydrolase enzyme for thermostability improvement.

Authors:  Gholamreza Farnoosh; Khosro Khajeh; Ali Mohammad Latifi; Hossein Aghamollaei
Journal:  J Biosci       Date:  2016-12       Impact factor: 1.826

8.  Non-structured amino-acid impact on GH11 differs from GH10 xylanase.

Authors:  Liangwei Liu; Xiaofeng Sun; Pengfei Yan; Linmin Wang; Hongge Chen
Journal:  PLoS One       Date:  2012-09-21       Impact factor: 3.240

9.  Engineering a disulfide bond in the lid hinge region of Rhizopus chinensis lipase: increased thermostability and altered acyl chain length specificity.

Authors:  Xiao-Wei Yu; Nian-Jiang Tan; Rong Xiao; Yan Xu
Journal:  PLoS One       Date:  2012-10-02       Impact factor: 3.240

10.  Highly Thermostable Xylanase Production from A Thermophilic Geobacillus sp. Strain WSUCF1 Utilizing Lignocellulosic Biomass.

Authors:  Aditya Bhalla; Kenneth M Bischoff; Rajesh Kumar Sani
Journal:  Front Bioeng Biotechnol       Date:  2015-06-16
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