Literature DB >> 1691623

A structural model for the genome of echovirus 22.

L A Seal1, R M Jamison.   

Abstract

We have proposed previously that the structural model for the echovirus 22 genome is a single-stranded RNA molecule that has folded back upon itself to form a stable "hairpin" at the 5'-terminus. The vRNA of echovirus 22 has been characterized further by digestion with selective ribonucleases, electrophoresis in composite gels, hydrodynamic studies in density gradients of Cs2SO4 and sucrose, thermal denaturation and 3'-terminal ribonucleotide analysis. Based on these observations, the genome of echovirus 22 is a single-stranded RNA molecule having a region of secondary structure located at the 5'-terminus that may be characterized as a snapback hairpin with hydrogen-bonded base-pairing. In addition, a VPg-like protein is attached (presumably to the 5'-end of the RNA) and the 3'-terminus contains a polyadenylic acid tract [poly (A)].

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Year:  1990        PMID: 1691623     DOI: 10.1007/bf01310504

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  37 in total

1.  A fractionating column for analysis of nucleic acids.

Authors:  J D MANDELL; A D HERSHEY
Journal:  Anal Biochem       Date:  1960-06       Impact factor: 3.365

2.  Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature.

Authors:  J MARMUR; P DOTY
Journal:  J Mol Biol       Date:  1962-07       Impact factor: 5.469

3.  Factors affecting the detection of enteroviruses in cerebrospinal fluid with coxsackievirus B3 and poliovirus 1 cDNA probes.

Authors:  H A Rotbart; M J Levin; L P Villarreal; S M Tracy; B L Semler; E Wimmer
Journal:  J Clin Microbiol       Date:  1985-08       Impact factor: 5.948

4.  Molecular cloning and sequence determination of the genomic regions encoding protease and genome-linked protein of three picornaviruses.

Authors:  G Werner; B Rosenwirth; E Bauer; J M Seifert; F J Werner; J Besemer
Journal:  J Virol       Date:  1986-03       Impact factor: 5.103

5.  Stable hairpin structure within the 5'-terminal 85 nucleotides of poliovirus RNA.

Authors:  G R Larsen; B L Semler; E Wimmer
Journal:  J Virol       Date:  1981-01       Impact factor: 5.103

6.  Evidence for secondary structure in poliovirus virion RNA demonstrated by antibodies against double-stranded RNA.

Authors:  J R Miller
Journal:  J Gen Virol       Date:  1979-12       Impact factor: 3.891

7.  Studies on reovirus RNA. I. Characterization of reovirus genome RNA.

Authors:  A R Bellamy; L Shapiro; J T August; W K Joklik
Journal:  J Mol Biol       Date:  1967-10-14       Impact factor: 5.469

8.  Internal organization of the ribosome.

Authors:  R I Cotter; P McPhie; W B Gratzer
Journal:  Nature       Date:  1967-12-02       Impact factor: 49.962

9.  VIRUS-SPECIFIC DOUBLE-STRANDED RNA IN POLIOVIRUS-INFECTED CELLS.

Authors:  D BALTIMORE; Y BECKER; J E DARNELL
Journal:  Science       Date:  1964-03-06       Impact factor: 47.728

10.  Structural units of reovirus ribonucleic acid and their possible functional significance.

Authors:  Y Watanabe; A F Graham
Journal:  J Virol       Date:  1967-08       Impact factor: 5.103

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  2 in total

1.  Cap-binding complex protein p220 is not cleaved during echovirus 22 replication in HeLa cells.

Authors:  B G Coller; S M Tracy; D Etchison
Journal:  J Virol       Date:  1991-07       Impact factor: 5.103

Review 2.  Parechoviruses.

Authors:  G Stanway; T Hyypiä
Journal:  J Virol       Date:  1999-07       Impact factor: 5.103

  2 in total

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