Literature DB >> 16909834

[EDAS, databases of alternatively spliced human genes].

R N Nurtdinov, A D Neverov, D B Mal'ko, I A Kosmodem'ianskiĭ, E O Ermakova, V E Ramenskiĭ, A A Mironov, M S Gel'fand.   

Abstract

EDAS, a database of alternatively spliced human genes, contains data on the alignment of proteins, mRNAs, and EST. It contains information on all exons and introns observed, as well as elementary alternatives formed from them. The database makes it possible to filter the output data by changing the cut-off threshold by the significance level. The database is accessible at http://www.gene-bee.msu.ru/edas/.

Entities:  

Mesh：

Year:  2006        PMID： 16909834

Source DB:  PubMed          Journal:  Biofizika        ISSN： 0006-3029


  6 in total

1.  Positive selection in alternatively spliced exons of human genes.

Authors:  Vasily E Ramensky; Ramil N Nurtdinov; Alexei D Neverov; Andrei A Mironov; Mikhail S Gelfand
Journal:  Am J Hum Genet       Date:  2008-06-19       Impact factor: 11.025

2.  Whole-genome sequencing identifies a novel ABCB7 gene mutation for X-linked congenital cerebellar ataxia in a large family of Mongolian ancestry.

Authors:  Maria S Protasova; Anastasia P Grigorenko; Tatiana V Tyazhelova; Tatiana V Andreeva; Denis A Reshetov; Fedor E Gusev; Alexander E Laptenko; Irina L Kuznetsova; Andrey Y Goltsov; Sergey A Klyushnikov; Sergey N Illarioshkin; Evgeny I Rogaev
Journal:  Eur J Hum Genet       Date:  2015-08-05       Impact factor: 4.246

3.  SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis.

Authors:  Ari B Kahn; Michael C Ryan; Hongfang Liu; Barry R Zeeberg; D Curtis Jamison; John N Weinstein
Journal:  BMC Bioinformatics       Date:  2007-03-05       Impact factor: 3.169

4.  Intergenic, gene terminal, and intragenic CpG islands in the human genome.

Authors:  Yulia A Medvedeva; Marina V Fridman; Nina J Oparina; Dmitry B Malko; Ekaterina O Ermakova; Ivan V Kulakovskiy; Andreas Heinzel; Vsevolod J Makeev
Journal:  BMC Genomics       Date:  2010-01-19       Impact factor: 3.969

5.  A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of human alternative splicing variants.

Authors:  Pierre de la Grange; Martin Dutertre; Margot Correa; Didier Auboeuf
Journal:  BMC Bioinformatics       Date:  2007-06-04       Impact factor: 3.169

6.  Computational analysis of splicing errors and mutations in human transcripts.

Authors:  Yerbol Z Kurmangaliyev; Mikhail S Gelfand
Journal:  BMC Genomics       Date:  2008-01-14       Impact factor: 3.969
  6 in total

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