Literature DB >> 16907643

Lark is the splicing factor RBM4 and exhibits unique subnuclear localization properties.

M Andrea Markus1, Brian J Morris.   

Abstract

Lark is an RNA-binding protein of the RNA recognition motif (RRM) class and, in Drosophila, Lark is required for embryonic development. In attempting to determine the function of human Lark we uncovered a frame-shift error in the published sequence to reveal that Lark is, in fact, RBM4, a recently described splicing regulator. We then went on to show that RBM4 localizes in nuclear speckles and nucleoli, supporting its potential role in splicing or RNA processing. Immunofluorescence imaging of full-length and mutated RBM4 revealed that the C-terminus of RBM4 is crucial for targeting to speckles. Unlike many other splicing factors, however, RBM4 does not contain an RS-domain or any other known targeting site. RBM4 redistributed to perinucleolar clusters upon the addition of a transcription inhibitor, whereas other splicing factors display increased localization to speckles in the absence of transcription. This finding is consistent with the potential existence of a novel subnuclear targeting pathway. In conclusion, RBM4 and Lark are the same protein, are localized in speckles and nucleoli, but can redistribute to perinucleolar clusters, consistent with a novel subnuclear pathway.

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Year:  2006        PMID: 16907643     DOI: 10.1089/dna.2006.25.457

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  10 in total

1.  The Drosophila RNA-binding protein Lark is required for localization of Dmoesin to the oocyte cortex during oogenesis.

Authors:  Gerard P McNeil; Manpreet Kaur; Sheryl Purrier; Ruth Kang
Journal:  Dev Genes Evol       Date:  2008-10-29       Impact factor: 0.900

2.  Posttranscriptional regulation of human endogenous retroviruses by RNA-binding motif protein 4, RBM4.

Authors:  Amir K Foroushani; Bryan Chim; Madeline Wong; Andre Rastegar; Patrick T Smith; Saifeng Wang; Kent Barbian; Craig Martens; Markus Hafner; Stefan A Muljo
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-05       Impact factor: 11.205

Review 3.  The distinct roles of zinc finger CCHC-type (ZCCHC) superfamily proteins in the regulation of RNA metabolism.

Authors:  Yishu Wang; Yu Yu; Yidan Pang; Haojun Yu; Wenqi Zhang; Xian Zhao; Jianxiu Yu
Journal:  RNA Biol       Date:  2021-05-04       Impact factor: 4.652

4.  Identification of RNA binding motif proteins essential for cardiovascular development.

Authors:  Samantha Maragh; Ronald A Miller; Seneca L Bessling; David M McGaughey; Marja W Wessels; Bianca de Graaf; Eric A Stone; Aida M Bertoli-Avella; John D Gearhart; Shannon Fisher; Andrew S McCallion
Journal:  BMC Dev Biol       Date:  2011-10-19       Impact factor: 1.978

5.  Genetic architecture of local adaptation in lunar and diurnal emergence times of the marine midge Clunio marinus (Chironomidae, Diptera).

Authors:  Tobias S Kaiser; David G Heckel
Journal:  PLoS One       Date:  2012-02-22       Impact factor: 3.240

6.  Alanine repeats influence protein localization in splicing speckles and paraspeckles.

Authors:  Shuo-Hsiu Chang; Wei-Lun Chang; Chia-Chen Lu; Woan-Yuh Tarn
Journal:  Nucleic Acids Res       Date:  2014-11-20       Impact factor: 16.971

Review 7.  How mRNA is misspliced in acute myelogenous leukemia (AML)?

Authors:  Aminetou Mint Mohamed; Morgan Thénoz; Françoise Solly; Marie Balsat; Franck Mortreux; Eric Wattel
Journal:  Oncotarget       Date:  2014-10-30

Review 8.  RNA-Binding Proteins in the Regulation of Adipogenesis and Adipose Function.

Authors:  Pengpeng Zhang; Wenyan Wu; Chaofeng Ma; Chunyu Du; Yueru Huang; Haixia Xu; Cencen Li; Xiaofang Cheng; Ruijie Hao; Yongjie Xu
Journal:  Cells       Date:  2022-07-31       Impact factor: 7.666

9.  Proteomics analysis of the nucleolus in adenovirus-infected cells.

Authors:  Yun W Lam; Vanessa C Evans; Kate J Heesom; Angus I Lamond; David A Matthews
Journal:  Mol Cell Proteomics       Date:  2009-10-07       Impact factor: 5.911

10.  Phylogenetic and molecular characterization of the splicing factor RBM4.

Authors:  Chia-Chen Lu; Tz-Hao Chen; Jhe-Rong Wu; Hung-Hsi Chen; Hsin-Yi Yu; Woan-Yuh Tarn
Journal:  PLoS One       Date:  2013-03-19       Impact factor: 3.240

  10 in total

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