Literature DB >> 16902002

Actinospica robiniae gen. nov., sp. nov. and Actinospica acidiphila sp. nov.: proposal for Actinospicaceae fam. nov. and Catenulisporinae subord. nov. in the order Actinomycetales.

Linda Cavaletti1, Paolo Monciardini1, Peter Schumann2, Manfred Rohde3, Ruggiero Bamonte1, Elena Busti1, Margherita Sosio1, Stefano Donadio1.   

Abstract

Two novel Gram-positive, acidophilic bacterial strains were isolated from forest soil. According to their 16S rRNA gene sequences, these strains are related closely to each other and form a distinct cluster within the order Actinomycetales. They show the typical features of filamentous actinomycetes, with branched vegetative hyphae and production of aerial hyphae. The distinct phylogenetic positions and the combination of chemotaxonomic characteristics of these strains justify the proposal of Actinospica gen. nov. Both strains display 3-hydroxydiaminopimelic acid plus traces of meso-diaminopimelic acid, the phospholipids diphosphatidylglycerol, phosphatidylethanolamine, methylphosphatidylethanolamine and phosphatidylinositol, the predominant cellular fatty acids i-C(15 : 0), i-C(16 : 0) and ai-C(15 : 0) and the whole-cell sugars mannose and rhamnose. They differ in the fatty acid profiles, in the quantitative ratios of the major menaquinones MK-9(H(4)), MK-9(H(6)) and MK-9(H(8)) and in the occurrence of additional whole-cell sugars (arabinose and xylose in strain GE134766(T) and galactose in strain GE134769(T)). Differences in the phenotypic characteristics and in the 16S rRNA gene sequences suggest the description of two species, Actinospica robiniae gen. nov., sp. nov. (the type species) and Actinospica acidiphila sp. nov., with the type strains GE134769(T) (=DSM 44927(T)=NRRL B-24432(T)) and GE134766(T) (=DSM 44926(T)=NRRL B-24431(T)), respectively. The DNA G+C contents of strains GE134769(T) and GE134766(T) are 70.8 and 69.2 mol%, respectively. Due to the large phylogenetic distance from known actinomycete genera, it is proposed to accommodate Actinospica gen. nov. in Actinospicaceae fam. nov. In addition, Catenulisporineae subord. nov. is proposed to harbour Actinospicaceae fam. nov. and the newly proposed family Catenulisporaceae, described in the accompanying paper.

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Year:  2006        PMID: 16902002     DOI: 10.1099/ijs.0.63859-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

1.  New lineage of filamentous, spore-forming, gram-positive bacteria from soil.

Authors:  Linda Cavaletti; Paolo Monciardini; Ruggiero Bamonte; Peter Schumann; Manfred Rohde; Margherita Sosio; Stefano Donadio
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Red soils harbor diverse culturable actinomycetes that are promising sources of novel secondary metabolites.

Authors:  Xiaoxuan Guo; Ning Liu; Xiaomin Li; Yun Ding; Fei Shang; Yongsheng Gao; Jisheng Ruan; Ying Huang
Journal:  Appl Environ Microbiol       Date:  2015-02-27       Impact factor: 4.792

3.  Acidophilic actinomycetes from rhizosphere soil: diversity and properties beneficial to plants.

Authors:  Nalin Poomthongdee; Kannika Duangmal; Wasu Pathom-aree
Journal:  J Antibiot (Tokyo)       Date:  2014-08-27       Impact factor: 2.649

4.  Complete genome sequence of Catenulispora acidiphila type strain (ID 139908).

Authors:  Alex Copeland; Alla Lapidus; Tijana Glavina Del Rio; Matt Nolan; Susan Lucas; Feng Chen; Hope Tice; Jan-Fang Cheng; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Mikhailova; Amrita Pati; Natalia Ivanova; Konstantinos Mavromatis; Amy Chen; Krishna Palaniappan; Patrick Chain; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Olga Chertkov; Thomas Brettin; John C Detter; Cliff Han; Zahid Ali; Brian J Tindall; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2009-09-24

5.  Actinospica durhamensis sp. nov., isolated from a spruce forest soil.

Authors:  Patrycja Golinska; Tiago Domingues Zucchi; Leonardo Silva; Hanna Dahm; Michael Goodfellow
Journal:  Antonie Van Leeuwenhoek       Date:  2015-05-31       Impact factor: 2.271

6.  Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence.

Authors:  Yun Kit Yeoh; Paul G Dennis; Chanyarat Paungfoo-Lonhienne; Lui Weber; Richard Brackin; Mark A Ragan; Susanne Schmidt; Philip Hugenholtz
Journal:  Nat Commun       Date:  2017-08-09       Impact factor: 14.919

7.  Domain-based Comparative Analysis of Bacterial Proteomes: Uniqueness, Interactions, and the Dark Matter.

Authors:  Liang Wang; Jianye Yang; Yaping Xu; Xue Piao; Jichang Lv
Journal:  Curr Genomics       Date:  2019-02       Impact factor: 2.236

8.  E40, a novel microbial protease efficiently detoxifying gluten proteins, for the dietary management of gluten intolerance.

Authors:  Linda Cavaletti; Anna Taravella; Lucia Carrano; Giacomo Carenzi; Alessandro Sigurtà; Nicola Solinas; Salvatore De Caro; Luigia Di Stasio; Stefania Picascia; Mariavittoria Laezza; Riccardo Troncone; Carmen Gianfrani; Gianfranco Mamone
Journal:  Sci Rep       Date:  2019-09-11       Impact factor: 4.379

Review 9.  Discovering new bioactive molecules from microbial sources.

Authors:  Paolo Monciardini; Marianna Iorio; Sonia Maffioli; Margherita Sosio; Stefano Donadio
Journal:  Microb Biotechnol       Date:  2014-03-24       Impact factor: 5.813

10.  Novel Polyethers from Screening Actinoallomurus spp.

Authors:  Marianna Iorio; Arianna Tocchetti; Joao Carlos Santos Cruz; Giancarlo Del Gatto; Cristina Brunati; Sonia Ilaria Maffioli; Margherita Sosio; Stefano Donadio
Journal:  Antibiotics (Basel)       Date:  2018-06-14
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